Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL12P25-202ENST00000598100 674 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC018618.2-201ENST00000604770 446 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC135178.6-201ENST00000605314 398 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC010424.2-201ENST00000607594 443 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 CR392039.4-201ENST00000624968 501 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC068724.3-201ENST00000625906 87 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AL049555.1-201ENST00000562834 1933 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC009951.1-201ENST00000623674 2614 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC006042.3-201ENST00000454684 1469 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC068446.1-201ENST00000556425 1549 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR1193-201ENST00000408109 78 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RN7SKP27-201ENST00000410684 333 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RNU2-72P-201ENST00000411175 163 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 PCNPP4-201ENST00000414817 517 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MTND4P11-201ENST00000417020 1058 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL17P35-201ENST00000432217 549 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 TXNP5-201ENST00000441043 315 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 OR52E3P-201ENST00000452083 936 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL23AP23-201ENST00000452590 471 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 NUTF2P7-201ENST00000453086 375 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC025768.1-201ENST00000510057 267 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP464-201ENST00000516251 108 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP392-201ENST00000516905 112 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC092709.1-201ENST00000521355 1045 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC025918.2-201ENST00000558683 763 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR3160-1-201ENST00000577972 85 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC092474.3-201ENST00000603022 568 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AL671309.1-201ENST00000603750 544 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC017076.1-201ENST00000607613 578 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR1264-201ENST00000616374 69 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC010300.1-201ENST00000600671 5134 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AC063976.2-201ENST00000425667 3556 ntBASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA1Q9Y5H4 AP001273.1-201ENST00000624493 3152 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR142-201ENST00000384835 87 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 LRRC37BP1-201ENST00000398851 714 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP345-201ENST00000410646 108 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 UBE2V1P11-201ENST00000411559 285 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms