Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4□□□□□ -1.77
CCDC88CQ9P219 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC017007.4-201ENST00000503353 1352 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC88CQ9P219 SNORA37-201ENST00000384504 129 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4□□□□□ -1.77
CCDC88CQ9P219 RPL23AP25-201ENST00000430973 463 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC009963.2-201ENST00000453431 138 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4□□□□□ -1.77
CCDC88CQ9P219 STMN1P2-201ENST00000508435 439 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC025884.1-201ENST00000556034 378 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4□□□□□ -1.77
CCDC88CQ9P219 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4□□□□□ -1.77
CCDC88CQ9P219 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
CCDC88CQ9P219 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
CCDC88CQ9P219 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC88CQ9P219 NOL8P1-201ENST00000508336 3529 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 MT-RNR1-201ENST00000389680 954 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 GSTM3P2-201ENST00000412746 530 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL158073.1-201ENST00000426848 1104 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL358472.1-201ENST00000431295 329 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 KCTD10P1-201ENST00000434203 625 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 KRT19P6-201ENST00000510983 209 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC095038.2-201ENST00000621464 1070 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL133243.3-201ENST00000617415 3004 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 VDAC2P1-201ENST00000399358 958 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 RPS3AP25-201ENST00000411660 793 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC239367.2-201ENST00000447309 705 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 RN7SL303P-201ENST00000469773 251 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC069240.1-201ENST00000548774 375 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 PSMB7P1-201ENST00000556349 514 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC006130.2-201ENST00000586202 326 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL161729.3-201ENST00000603533 673 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 AL445363.3-201ENST00000623080 671 ntBASIC3.99□□□□□ -1.77
CCDC88CQ9P219 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC88CQ9P219 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 SNORD66.1-201ENST00000391230 76 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ATP5F1P2-201ENST00000398143 760 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 RN7SKP27-201ENST00000410684 333 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 RN7SKP182-201ENST00000410772 298 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AC108032.1-201ENST00000416706 207 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 GOLGA5P1-201ENST00000507317 980 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AC012603.1-201ENST00000606424 528 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ASNSP1-204ENST00000641977 1664 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AL449283.1-201ENST00000602631 3403 ntBASIC3.98□□□□□ -1.77
CCDC88CQ9P219 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC88CQ9P219 AP000756.2-201ENST00000624168 2567 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms