Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 MTND2P41-201ENST00000637599 773 ntBASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 AC012618.3-205ENST00000637896 1496 ntBASIC5.06□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 RNA5SP87-201ENST00000384155 118 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC013404.1-201ENST00000413068 249 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC005005.2-201ENST00000420779 380 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 OR5M12P-201ENST00000423388 929 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 FTH1P16-201ENST00000435241 552 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 MTCO2P20-201ENST00000437339 673 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 BTF3P6-201ENST00000448054 499 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AL031313.1-201ENST00000448435 256 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 COX6B1P5-201ENST00000509843 249 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 OR7E128P-201ENST00000532736 1024 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC008033.2-201ENST00000542626 177 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC011611.5-201ENST00000552477 578 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC106052.1-201ENST00000608029 497 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC006386.1-201ENST00000619436 415 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC022106.2-201ENST00000620114 757 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC017104.5-201ENST00000637647 639 ntBASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NCKIPSDQ9NZQ3 SDAD1P1-202ENST00000524156 2051 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AC017007.4-201ENST00000503353 1352 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 RNA5SP27-201ENST00000363839 119 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 RN7SKP113-201ENST00000363891 295 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 HMGB3P18-201ENST00000406327 590 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 HMGB3P31-201ENST00000413333 595 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AC115285.1-201ENST00000424879 736 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AL360081.1-201ENST00000428299 555 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 SETP8-201ENST00000435341 628 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 ARF4P4-201ENST00000439608 520 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 snoU13.20-201ENST00000459180 104 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 SNORD11.1-201ENST00000459482 85 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 MTCO3P35-201ENST00000485582 781 ntBASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NCKIPSDQ9NZQ3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms