Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AL391684.1-202ENST00000641293 1636 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 TMSB4XP4-201ENST00000323496 618 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 SNORA17A-201ENST00000391185 133 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 HSPD1P16-201ENST00000402302 394 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC069282.1-201ENST00000411911 526 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 MTCYBP7-201ENST00000419540 1134 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CDY14P-201ENST00000431260 1014 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 OR52B5P-201ENST00000435337 951 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AP000936.3-201ENST00000438127 255 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 ELOCP8-201ENST00000439309 332 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CDY12P-201ENST00000440679 1015 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 ELOCP15-201ENST00000442090 332 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CDY13P-201ENST00000445813 1015 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CDY23P-201ENST00000451661 1014 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 DDX39BP2-208ENST00000453923 258 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 RPSAP39-201ENST00000467439 883 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 SYT14P1-201ENST00000481459 721 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 RN7SL101P-201ENST00000496350 279 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 NAMPTP2-201ENST00000505629 1115 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC091868.1-201ENST00000508746 304 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 MIR3614-201ENST00000581261 86 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 MIR4691-201ENST00000583764 85 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC020910.3-201ENST00000603701 874 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AL391834.2-201ENST00000609982 546 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 FAM27B-201ENST00000610601 213 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC233309.1-201ENST00000619522 751 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC105105.5-201ENST00000622635 1294 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AL049777.1-201ENST00000622740 518 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AP002505.2-201ENST00000623585 696 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 SNORA17.5-201ENST00000630429 132 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 OR52B5P-202ENST00000641118 1110 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 MTND4P9-201ENST00000507819 1346 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 AC012020.1-201ENST00000624541 1728 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 RARSP1-201ENST00000542842 1418 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 NCLP2-201ENST00000416078 1462 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RNU6-609P-201ENST00000365459 107 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 MIR143-201ENST00000385300 106 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RSL24D1P1-201ENST00000404972 493 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RPL23AP48-201ENST00000406913 488 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 U3.36-201ENST00000408418 213 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RN7SKP267-201ENST00000410381 285 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 OR51B3P-201ENST00000412287 913 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 LYPLA1P1-201ENST00000434514 622 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RPL7P11-201ENST00000437586 658 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC079804.1-201ENST00000461922 436 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RPS26P39-201ENST00000469206 341 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC108693.1-201ENST00000496068 432 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 SNRPCP2-201ENST00000504370 475 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC021146.7-201ENST00000509604 775 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC112198.4-201ENST00000515450 351 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC090819.1-201ENST00000523800 1111 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 PHBP17-201ENST00000528576 541 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms