Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC092324.1-201ENST00000468671 324 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC108751.2-201ENST00000469993 231 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 PPM1AP1-201ENST00000502740 1135 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 HMGB1P1-201ENST00000522557 636 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 OR5D15P-201ENST00000531671 942 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 UBE2FP2-201ENST00000566646 462 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC209154.1-201ENST00000582156 337 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 BNIP3P19-201ENST00000605397 577 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC092574.1-201ENST00000609771 420 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 MIR6853-201ENST00000619642 74 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC022106.2-201ENST00000620114 757 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AC091953.3-201ENST00000623220 236 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AP002371.2-201ENST00000624450 503 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 AL132640.2-201ENST00000559968 1698 ntBASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BLOC1S4Q9NUP1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 RNU6-543P-201ENST00000362576 108 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 SNORA51.12-201ENST00000384448 134 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 MIR1271-201ENST00000408537 86 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 RPS27P18-201ENST00000431701 247 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 RPL36AP41-201ENST00000493820 306 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC025164.1-201ENST00000496249 478 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 PGBD4P4-201ENST00000509673 613 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC022790.1-201ENST00000522872 204 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 PCNPP1-201ENST00000552501 511 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC079075.1-201ENST00000559543 878 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC095057.3-201ENST00000567102 1157 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 RN7SL652P-201ENST00000577769 300 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC011477.5-201ENST00000586571 259 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC098935.2-201ENST00000604222 466 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AC096586.1-201ENST00000610267 561 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AL031595.2-201ENST00000624215 19071 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
BLOC1S4Q9NUP1 AL672167.1-203ENST00000641299 2975 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 SNORA63.3-201ENST00000362682 132 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 RNU6-1339P-201ENST00000363574 91 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 RNU6-481P-201ENST00000384194 107 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 MTATP6P31-201ENST00000406985 692 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 RNU2-6P-201ENST00000411404 190 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC073136.2-201ENST00000417282 849 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC140479.3-201ENST00000418944 1126 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AL360081.1-201ENST00000428299 555 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 BRWD1P3-201ENST00000428816 390 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 RPL34P6-201ENST00000432390 345 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC092170.1-201ENST00000440211 356 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 GEMIN8P3-201ENST00000445417 720 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 RPL35AP28-201ENST00000459730 331 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC090142.1-201ENST00000465776 462 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC112206.1-201ENST00000468416 477 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms