Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 HMGB1P19-201ENST00000517578 577 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC022882.1-201ENST00000532142 501 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AL049830.4-201ENST00000555149 351 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 MIR3939-201ENST00000582614 106 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 MIR3138-201ENST00000585238 82 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 MIMT1-201ENST00000597105 1050 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC084373.1-201ENST00000603311 235 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC090948.1-201ENST00000607464 549 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC108467.2-201ENST00000617640 1597 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AP005019.3-201ENST00000620418 560 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC074029.4-201ENST00000624796 1859 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC025031.4-201ENST00000621248 3271 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 SALL4P2-201ENST00000423288 2910 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC009313.2-201ENST00000417893 1941 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 CASC19-284ENST00000642142 1868 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC125257.1-201ENST00000560400 2930 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 OR5T3-201ENST00000303059 1023 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC011155.1-201ENST00000316512 456 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 HSPD1P16-201ENST00000402302 394 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 OR1F12-201ENST00000402365 945 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 GSTA12P-201ENST00000402398 508 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AL589655.1-201ENST00000405398 482 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 BTF3P9-201ENST00000418784 283 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 RPL7P57-201ENST00000423238 740 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 RGS17P1-201ENST00000423358 553 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC092013.1-201ENST00000438795 332 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AL162388.1-201ENST00000450912 352 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 IFNWP4-201ENST00000453148 294 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AP002345.1-201ENST00000456493 928 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 RPL5P13-201ENST00000462840 709 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC020898.1-201ENST00000474167 787 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC025164.1-201ENST00000496249 478 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC138701.1-201ENST00000524329 714 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC012414.2-201ENST00000559474 187 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC010857.1-201ENST00000606398 594 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 AL133412.1-201ENST00000380194 2992 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.75□□□□□ -1.65
HPS4Q9NQG7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS4Q9NQG7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 RNA5SP515-201ENST00000364570 118 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 OR6C69P-201ENST00000394268 893 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 RPS24P12-201ENST00000402084 394 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 Z98745.1-201ENST00000402553 494 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 AL590623.1-201ENST00000427864 105 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS4Q9NQG7 AC108751.2-201ENST00000469993 231 ntBASIC4.74□□□□□ -1.65
HPS4Q9NQG7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms