Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 IFNNP1-201ENST00000429219 553 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 MTCO1P54-201ENST00000430139 712 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 HMGB3P24-201ENST00000433260 622 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC006335.2-201ENST00000437993 330 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL591503.2-201ENST00000442314 1005 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 MTCO2P25-201ENST00000447065 681 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AL935212.3-201ENST00000450729 284 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 TRBV8-2-201ENST00000475637 270 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC037198.2-201ENST00000478845 733 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC091544.1-201ENST00000484702 348 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 IMPA1P1-201ENST00000510718 842 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC079395.1-201ENST00000510981 262 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 EIF3KP3-201ENST00000514461 639 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 IGJP1-201ENST00000522682 475 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 OR5AZ1P-201ENST00000527448 943 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 OR4C2P-201ENST00000530855 1064 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DPPA2P4-201ENST00000563717 878 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC114947.2-201ENST00000565748 2125 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC012213.3-201ENST00000577199 777 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 MIR4489-201ENST00000578869 62 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC080078.2-201ENST00000603766 501 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RN7SKP299-201ENST00000606679 301 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC004948.1-201ENST00000609858 672 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC004223.4-201ENST00000612426 332 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC025574.2-201ENST00000615621 514 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 SAMMSON-227ENST00000642114 1199 ntBASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
AMBRA1Q9C0C7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 MRE11P1-201ENST00000464884 2127 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC093311.1-201ENST00000506586 2021 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC007996.1-201ENST00000620414 2821 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL391994.1-201ENST00000254724 282 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU1-19P-201ENST00000363306 165 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-1320P-201ENST00000390838 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-1269P-201ENST00000391139 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 MIR1303-201ENST00000408625 86 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNA5SP80-201ENST00000410475 111 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU2-22P-201ENST00000411266 212 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 MRPS36P1-201ENST00000421291 307 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL355433.1-201ENST00000422804 300 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RPS3AP44-201ENST00000425466 790 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RPL19P16-201ENST00000433839 588 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC064862.4-201ENST00000442180 334 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU7-27P-201ENST00000459281 62 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-599P-201ENST00000459383 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-1193P-201ENST00000459461 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RPL5P24-201ENST00000463742 885 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC022215.1-201ENST00000481770 362 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC092045.1-201ENST00000495716 1231 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms