Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 U3.23-201ENST00000391132 200 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC002524.1-201ENST00000411687 547 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 HMGN1P14-201ENST00000412459 517 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL096829.1-201ENST00000413677 457 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL109913.1-201ENST00000421173 514 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC009480.2-201ENST00000422916 432 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL354766.1-201ENST00000423396 542 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RPL12P12-201ENST00000424633 501 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 B3GNT2P1-201ENST00000434960 952 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 UBE2V1P3-201ENST00000439651 417 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 MTCO3P18-201ENST00000440206 761 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 MTND6P5-201ENST00000448266 512 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 PPIAP27-201ENST00000453800 265 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 PPIAP7-201ENST00000454070 489 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 PFN1P6-201ENST00000476786 399 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RPS4XP15-201ENST00000489210 795 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RPL7P51-201ENST00000490532 749 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC083795.1-201ENST00000491760 320 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LSM3P4-201ENST00000502948 309 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC025458.1-201ENST00000506046 166 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC011411.1-201ENST00000509592 876 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AP000620.1-201ENST00000527147 504 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 DPPA2P4-201ENST00000563717 878 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC012146.2-201ENST00000576545 416 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL513327.3-201ENST00000602618 469 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 NANOGP3-201ENST00000605855 286 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC008945.2-201ENST00000606056 604 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RFPL4AP6-201ENST00000616792 846 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 CR381653.2-201ENST00000624041 768 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AL157786.1-207ENST00000627771 695 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC100871.1-201ENST00000507871 1456 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.70-201ENST00000362886 110 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 RNA5SP156-201ENST00000410250 110 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 NMD3P2-201ENST00000421815 761 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC099670.2-201ENST00000435130 321 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC023141.3-201ENST00000436698 278 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AL353662.1-201ENST00000439099 327 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC016027.4-201ENST00000450866 277 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AL606490.1-201ENST00000452266 765 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC098824.1-201ENST00000453565 980 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 GTF2IP8-201ENST00000560687 584 ntBASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXP3Q9BZS1 AC092332.1-201ENST00000563684 829 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms