Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 AL591135.1-201ENST00000401578 5914 ntBASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 MTND5P1-201ENST00000445440 1375 ntBASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 ELL2P4-201ENST00000446870 1376 ntBASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 AC007529.1-201ENST00000418574 2178 ntBASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 KARSP2-201ENST00000415696 1639 ntBASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LCE3DQ9BYE3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AC004656.1-201ENST00000568479 4951 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 MFSD8-239ENST00000641590 2479 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AC007012.2-201ENST00000623206 1676 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNA5SP250-201ENST00000362534 119 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNA5SP389-201ENST00000362610 115 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNA5SP226-201ENST00000362653 115 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 Y_RNA.133-201ENST00000363428 110 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNA5SP333-201ENST00000363466 118 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SNORD113-7-201ENST00000363762 77 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 Y_RNA.197-201ENST00000364004 102 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNA5SP334-201ENST00000364825 118 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNU1-122P-201ENST00000365538 156 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AL139327.1-201ENST00000382988 348 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SNORA10-201ENST00000384084 133 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNU6-1226P-201ENST00000384317 107 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 TRBV7-5-201ENST00000390382 345 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SNORD37.1-201ENST00000390968 65 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNU6-903P-201ENST00000391270 109 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 SNORA75.4-201ENST00000391278 119 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AL031864.1-201ENST00000392075 423 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 AL360182.1-201ENST00000397433 468 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 MIR548K-201ENST00000408406 116 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNU2-39P-201ENST00000410604 198 ntBASIC1.94□□□□□ -2.1
LCE3DQ9BYE3 RNU6-387P-201ENST00000411331 105 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms