Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 MAPK10-253ENST00000641010 4072 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 SPRR2C-201ENST00000290702 219 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL359837.1-201ENST00000381357 287 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC097374.1-203ENST00000400783 485 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL035696.2-201ENST00000407941 709 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 OR8G2P-201ENST00000412796 908 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 NRBF2P2-201ENST00000413087 861 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 OR2X1P-201ENST00000421144 687 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 SNORA84-201ENST00000459229 133 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC034236.1-201ENST00000469891 373 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 ATP1B1P1-201ENST00000509767 915 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 PPBPP1-201ENST00000510807 373 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 RNU6-943P-201ENST00000516960 98 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 OR8R1P-201ENST00000543943 764 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC234775.3-201ENST00000564612 656 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL354984.3-201ENST00000604803 325 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AL122126.1-201ENST00000546905 1318 ntBASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RPAP1Q9BWH6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RPAP1Q9BWH6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.21□□□□□ -1.57
RPAP1Q9BWH6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 MIR1911-201ENST00000410783 80 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AL356095.1-201ENST00000417217 199 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 Z95327.1-201ENST00000446082 482 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 ABCF2P2-201ENST00000450549 296 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AL592156.1-201ENST00000508758 304 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 PARP4P3-201ENST00000510265 317 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AL031666.3-201ENST00000609320 1006 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 FAM27D1-201ENST00000612308 341 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AL138721.1-201ENST00000616756 179 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 AC123912.3-201ENST00000600907 1367 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 VPS35P1-201ENST00000563400 1518 ntBASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RPAP1Q9BWH6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AL589994.1-201ENST00000404962 340 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 RPS20P14-201ENST00000412545 360 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AL512326.1-201ENST00000443050 721 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AC010374.1-201ENST00000503762 1237 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 OR5BC1P-201ENST00000529327 739 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms