Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL136131.1-201ENST00000406079 803 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 MYL12AP1-201ENST00000518490 515 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AC109635.6-201ENST00000525487 1113 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 AL731566.2-201ENST00000618971 317 ntBASIC4.45□□□□□ -1.7
C9orf72Q96LT7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.45□□□□□ -1.7
C9orf72Q96LT7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC123912.3-201ENST00000600907 1367 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 SNORD74.4-201ENST00000364129 80 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AL732292.1-201ENST00000426692 226 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC022022.1-201ENST00000430304 178 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 NDUFA5P1-201ENST00000433858 341 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC099063.2-201ENST00000446360 662 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 EIF2S2P2-201ENST00000447161 982 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC026979.1-201ENST00000492525 396 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 PARP4P3-201ENST00000510265 317 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 IGKV2D-10-201ENST00000520194 281 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC115989.2-201ENST00000578640 563 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 MIR432-201ENST00000606207 94 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AL121873.1-201ENST00000616013 524 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AP005019.3-201ENST00000620418 560 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 BMS1P21-201ENST00000634565 365 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 RAD17P1-201ENST00000418130 2042 ntBASIC4.44□□□□□ -1.7
C9orf72Q96LT7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf72Q96LT7 AL133243.3-201ENST00000617415 3004 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL121834.1-202ENST00000404494 277 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL592293.2-201ENST00000422292 996 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 RPL12P34-201ENST00000424532 479 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 IPMKP1-201ENST00000425988 855 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 EIF2S2P3-201ENST00000428356 999 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 RPL21P133-201ENST00000443666 476 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC243772.1-201ENST00000451620 410 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 RPL35AP15-201ENST00000468042 339 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC105918.1-201ENST00000474399 838 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC037198.2-201ENST00000478845 733 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC093267.1-201ENST00000489176 961 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC108145.1-201ENST00000503770 153 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL352979.3-201ENST00000553515 247 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AC115286.1-201ENST00000604298 434 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 AL445423.1-201ENST00000609941 536 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
C9orf72Q96LT7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.43□□□□□ -1.7
C9orf72Q96LT7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf72Q96LT7 RNA5SP388-201ENST00000362584 119 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms