Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 RPS21P4-201ENST00000487122 248 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC034244.1-201ENST00000507687 207 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC138938.1-201ENST00000515431 782 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 HSPE1P2-201ENST00000554777 306 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 MIR1269B-201ENST00000580405 75 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 ZNF92P3-201ENST00000596594 954 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL451064.1-201ENST00000607718 471 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AP000255.1-201ENST00000610276 676 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC037198.3-201ENST00000616754 526 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC015871.5-202ENST00000623252 701 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AP003399.1-201ENST00000637534 361 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 ZNF663P-202ENST00000641770 1131 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS50Q96JG6 NEAT1-202ENST00000501122 22743 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 Z95327.2-201ENST00000414579 1873 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 SMG1P6-201ENST00000532337 2930 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 OR5H2-201ENST00000355273 945 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 RNA5SP234-201ENST00000363916 119 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 SNORD116-8-201ENST00000384365 95 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 RNU6-549P-201ENST00000384433 107 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 RNU6-83P-201ENST00000384568 112 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 SNORA40.2-201ENST00000390847 128 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 ERHP2-201ENST00000402323 299 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 CDY14P-201ENST00000431260 1014 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 CYCSP11-201ENST00000436426 315 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 CDY12P-201ENST00000440679 1015 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 CDY13P-201ENST00000445813 1015 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 CDY23P-201ENST00000451661 1014 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC011225.1-201ENST00000457751 369 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AL591473.1-201ENST00000464297 313 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 RPL7P40-201ENST00000481703 745 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC069528.1-202ENST00000482888 637 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC084024.2-201ENST00000503480 791 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 HMGB1P44-201ENST00000508597 572 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC105313.1-201ENST00000509121 353 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 MTND6P2-201ENST00000512226 524 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC005341.1-201ENST00000571086 708 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AP001269.3-201ENST00000588718 329 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC009237.13-201ENST00000603193 276 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 Z94722.1-201ENST00000604328 474 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AP003392.5-201ENST00000607857 415 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC004943.3-201ENST00000624116 600 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS50Q96JG6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AC093311.1-201ENST00000506586 2021 ntBASIC5.16□□□□□ -1.58
VPS50Q96JG6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS50Q96JG6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS50Q96JG6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS50Q96JG6 AL672167.1-204ENST00000641875 3017 ntBASIC5.15□□□□□ -1.58
VPS50Q96JG6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms