Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 FLJ42393-201ENST00000623801 2270 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 Y_RNA.180-201ENST00000363867 113 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 RNA5SP198-201ENST00000410376 127 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC078974.1-201ENST00000411597 223 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 RSL24D1P6-201ENST00000426934 401 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AL138799.3-201ENST00000438968 350 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 BX323845.2-201ENST00000458382 234 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 RN7SL870P-201ENST00000460111 296 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 PPIAP19-201ENST00000486414 492 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 RNU6-255P-201ENST00000516957 105 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 RNU6-714P-201ENST00000516963 103 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 RNA5SP454-201ENST00000517231 127 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC015967.1-201ENST00000619893 476 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.58□□□□□ -1.2
LRCH3Q96II8 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LRCH3Q96II8 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.58□□□□□ -1.2
LRCH3Q96II8 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC068860.1-201ENST00000623701 3736 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC005592.1-201ENST00000566527 1640 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LRCH3Q96II8 HCG18-244ENST00000602516 2890 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 RPL23AP57-201ENST00000332361 466 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 RNU6-890P-201ENST00000384121 107 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 RNU6-187P-201ENST00000384139 106 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 Y_RNA.496-201ENST00000384444 101 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 RNU6-601P-201ENST00000384540 107 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC093155.2-201ENST00000420734 937 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AL139396.1-201ENST00000421137 167 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 RPL21P91-201ENST00000429231 479 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AL645939.3-201ENST00000435408 225 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 OR1H1P-201ENST00000448731 937 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 PCMTD1P1-201ENST00000455560 355 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC099340.1-201ENST00000475247 599 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AL049874.2-201ENST00000492636 288 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 MTND1P19-201ENST00000511780 315 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 SNORA74.1-201ENST00000516320 180 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 RNU6-182P-201ENST00000516970 105 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.57□□□□□ -1.2
LRCH3Q96II8 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC040162.2-201ENST00000573092 157 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AL591167.1-201ENST00000607321 456 ntBASIC7.57□□□□□ -1.2
LRCH3Q96II8 AC022467.1-201ENST00000614738 749 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms