Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 OR4C2P-201ENST00000530855 1064 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 UBE2NP1-201ENST00000545592 458 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 RN7SL290P-201ENST00000578661 300 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 VN1R84P-201ENST00000593697 235 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AL590229.1-201ENST00000603497 542 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC011453.2-201ENST00000603737 729 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC008814.1-201ENST00000603797 406 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC009597.2-201ENST00000604659 592 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC096553.1-201ENST00000605169 829 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 HULC.1-201ENST00000612720 240 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 RBPJP2-201ENST00000618187 1444 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC019072.1-201ENST00000604535 1551 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AP001029.2-203ENST00000589795 4910 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 AC235565.1-201ENST00000456962 1325 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 Z99496.1-201ENST00000469424 1477 ntBASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CTHRC1Q96CG8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC109446.4-201ENST00000623235 2755 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC025263.3-201ENST00000622965 1396 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC006210.2-201ENST00000367074 1545 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 IL6STP1-201ENST00000346911 1020 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 OR1L6-202ENST00000373684 1044 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RNU1-149P-201ENST00000390870 161 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 MIR1286-201ENST00000408112 78 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AL355433.1-201ENST00000422804 300 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RPL7L1P9-201ENST00000431298 745 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC098826.1-201ENST00000433943 471 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 SEPT7P5-201ENST00000434048 306 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC096638.2-201ENST00000434965 711 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RPS7P5-201ENST00000441482 581 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 ATP5C1P1-201ENST00000441945 895 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AL163193.1-201ENST00000444895 788 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC073387.1-201ENST00000453261 709 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 CBX1P2-201ENST00000453841 458 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RPL5P24-201ENST00000463742 885 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC024558.1-201ENST00000505008 528 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC104090.1-201ENST00000506341 1171 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC021146.8-201ENST00000507455 733 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC105185.1-201ENST00000518705 535 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC087808.1-201ENST00000520501 361 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC138832.1-201ENST00000522871 556 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC027369.5-201ENST00000533838 755 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 AC005832.3-201ENST00000537929 631 ntBASIC4.93□□□□□ -1.62
CTHRC1Q96CG8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms