Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC019227.1-201ENST00000526902 510 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC125494.3-201ENST00000602759 455 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC105254.2-201ENST00000603636 436 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC104687.2-201ENST00000604442 342 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC144521.1-201ENST00000607148 956 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC016542.1-201ENST00000608259 493 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC009318.3-201ENST00000616916 503 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC073569.3-201ENST00000619055 682 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL445528.2-201ENST00000620582 470 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC019206.1-201ENST00000621938 425 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AP000943.4-201ENST00000622912 357 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC015804.1-201ENST00000622935 435 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC093875.1-201ENST00000623688 504 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 AP003072.4-201ENST00000624580 310 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC132825.7-201ENST00000638744 335 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL049555.1-201ENST00000562834 1933 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AC022031.1-201ENST00000585985 2593 ntBASIC4.26□□□□□ -1.73
RFT1Q96AA3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RFT1Q96AA3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFT1Q96AA3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 SEC63P2-201ENST00000503863 1939 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 ENSAP3-201ENST00000312710 333 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 OR4K17-201ENST00000315543 1032 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 RN7SKP162-201ENST00000363605 345 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 RN7SKP160-201ENST00000363804 340 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 RN7SKP15-201ENST00000364742 309 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 U3.25-201ENST00000391209 220 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 RPL31P52-201ENST00000407532 367 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL121776.1-201ENST00000429337 372 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 OR52B5P-201ENST00000435337 951 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 RPS29P9-201ENST00000440360 171 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 TPTE2P6-202ENST00000445572 1007 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL354714.3-201ENST00000447284 493 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 FAR2P1-206ENST00000449736 709 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL035407.2-201ENST00000454090 378 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC026348.1-201ENST00000462549 1053 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 OR4A46P-201ENST00000527255 933 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 DEFB109D-201ENST00000529497 240 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AP003717.3-201ENST00000544832 1180 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC122134.1-202ENST00000569111 1201 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC017076.1-201ENST00000607613 578 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC126915.2-201ENST00000610957 190 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC012414.7-202ENST00000622705 1090 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC024595.1-201ENST00000623088 387 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 OR52B5P-202ENST00000641118 1110 ntBASIC4.25□□□□□ -1.73
RFT1Q96AA3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RFT1Q96AA3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFT1Q96AA3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.24□□□□□ -1.73
RFT1Q96AA3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.24□□□□□ -1.73
RFT1Q96AA3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFT1Q96AA3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
RFT1Q96AA3 ECM1P2-201ENST00000503354 1577 ntBASIC4.24□□□□□ -1.73
RFT1Q96AA3 RNU1-108P-201ENST00000362556 161 ntBASIC4.24□□□□□ -1.73
RFT1Q96AA3 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
RFT1Q96AA3 RNU6-354P-201ENST00000383862 107 ntBASIC4.24□□□□□ -1.73
RFT1Q96AA3 RNU6-610P-201ENST00000384264 107 ntBASIC4.24□□□□□ -1.73
RFT1Q96AA3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms