Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC114947.2-201ENST00000565748 2125 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HPS3Q969F9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
HPS3Q969F9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 ATP5F1P2-201ENST00000398143 760 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 ERHP2-201ENST00000402323 299 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 RN7SKP126-201ENST00000411143 300 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 HMGN2P27-201ENST00000427352 270 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.68□□□□□ -1.5
HPS3Q969F9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL161722.2-201ENST00000434731 981 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AC092809.1-201ENST00000441469 474 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 FHP1-201ENST00000442741 703 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 VN1R40P-201ENST00000455196 941 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL049874.2-201ENST00000492636 288 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.68□□□□□ -1.5
HPS3Q969F9 RNU6-416P-201ENST00000516265 103 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 snoU109.6-201ENST00000516831 118 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC126915.2-201ENST00000610957 190 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 TUSC7.1-201ENST00000610969 165 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AC135068.12-201ENST00000637370 931 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HPS3Q969F9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HPS3Q969F9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 PANDAR-201ENST00000629595 1506 ntBASIC5.68□□□□□ -1.5
HPS3Q969F9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HPS3Q969F9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HPS3Q969F9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HPS3Q969F9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 PCAT14-202ENST00000627127 3935 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HPS3Q969F9 AC112198.2-201ENST00000426589 6996 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HPS3Q969F9 RNU6-304P-201ENST00000364855 107 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 OR1L1-202ENST00000373686 1083 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.67□□□□□ -1.5
HPS3Q969F9 SNORA51.12-201ENST00000384448 134 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL590084.1-201ENST00000407885 387 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 MIR1286-201ENST00000408112 78 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 ELOCP9-201ENST00000418624 239 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL009174.1-201ENST00000426577 416 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 MTCO1P3-201ENST00000429327 192 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 RPL7P4-203ENST00000430239 730 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC009238.2-201ENST00000431026 355 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 RPS27P18-201ENST00000431701 247 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 YWHAQP9-201ENST00000445891 512 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 TPMTP4-201ENST00000450749 678 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AURKAPS1-201ENST00000451805 1212 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AL354710.1-201ENST00000453641 246 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 RN7SL222P-201ENST00000476452 299 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 RPL7P39-201ENST00000481157 744 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 MTND2P14-201ENST00000482139 351 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 RPS23P1-201ENST00000491662 432 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC084024.2-201ENST00000503480 791 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC091951.3-201ENST00000504093 246 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.67□□□□□ -1.5
HPS3Q969F9 AL671862.1-201ENST00000515851 349 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC024940.3-201ENST00000538551 316 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC068993.1-201ENST00000546724 589 ntBASIC5.67□□□□□ -1.5
HPS3Q969F9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms