Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC104229.1-201ENST00000561364 255 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 RNF138P2-201ENST00000603490 592 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC112220.2-201ENST00000605513 533 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC012557.1-201ENST00000607115 611 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AP005432.2-201ENST00000608162 586 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC021851.1-201ENST00000608537 1082 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 AL512427.1-201ENST00000618593 349 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AL078595.3-201ENST00000623815 1166 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 AC097655.1-201ENST00000635075 318 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 ECM1P2-201ENST00000503354 1577 ntBASIC4.56□□□□□ -1.68
TM9SF4Q92544 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF4Q92544 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
TM9SF4Q92544 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR13C3-201ENST00000374781 1108 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 SNORA70.10-201ENST00000384515 134 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 RPS3AP25-201ENST00000411660 793 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 GTF2IP5-201ENST00000414608 731 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 CNOT7P1-201ENST00000429006 852 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 NRBF2P3-201ENST00000432731 865 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC093414.1-201ENST00000434712 514 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 TMX2P1-201ENST00000436507 708 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AURKAPS2-201ENST00000454983 333 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 DUXAP8-207ENST00000456786 622 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 HSPE1P22-201ENST00000456856 327 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 RN7SL459P-201ENST00000481078 302 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF4Q92544 SUMO2P5-201ENST00000506790 245 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC133963.2-201ENST00000513686 578 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 RN7SKP276-201ENST00000516242 268 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 Y_RNA.717-201ENST00000517106 92 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 C1GALT1P3-201ENST00000522049 819 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR7E13P-201ENST00000526052 910 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC116553.2-201ENST00000564203 463 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 BNIP3P38-201ENST00000601117 544 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 DUXAP10-204ENST00000612052 616 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AC120338.1-201ENST00000625074 1541 ntBASIC4.55□□□□□ -1.68
TM9SF4Q92544 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF4Q92544 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF4Q92544 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF4Q92544 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF4Q92544 ZNF90P1-201ENST00000480493 1951 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 RNA5SP505-201ENST00000364748 108 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ATP5HP3-201ENST00000396994 486 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC096533.1-201ENST00000411645 353 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 VN1R51P-201ENST00000411675 945 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 RPL26P37-201ENST00000411983 438 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 EIF4A1P1-201ENST00000420241 934 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms