Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 RNU5E-10P-201ENST00000363506 118 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 RNU1-106P-201ENST00000384382 164 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AL645927.1-201ENST00000396783 406 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 RN7SKP213-201ENST00000410746 298 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 LINC01347-201ENST00000417964 355 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 TCEA1P2-201ENST00000420496 906 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 OR6K4P-201ENST00000423179 955 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 ARF4P4-201ENST00000439608 520 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC021205.1-201ENST00000468797 348 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 BX284632.1-201ENST00000478218 541 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC008427.1-201ENST00000503102 655 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 PRELID3BP6-201ENST00000503839 571 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 HIGD1AP18-201ENST00000520730 278 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC092490.3-201ENST00000545370 572 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AL121594.4-201ENST00000556211 1196 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC023825.1-201ENST00000566704 1030 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 MIR5699-201ENST00000578903 90 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 RN7SL52P-201ENST00000584271 284 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC119501.1-201ENST00000603646 475 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC018618.2-201ENST00000604770 446 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC018754.1-201ENST00000607486 925 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC093799.2-201ENST00000610062 578 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AC010435.1-201ENST00000623353 1177 ntBASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A1Q8WWI5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 ZFRP1-201ENST00000457579 2970 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 VN2R3P-201ENST00000422626 1412 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RNU5B-4P-201ENST00000363508 111 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RPS27AP11-201ENST00000402798 447 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC096533.1-201ENST00000411645 353 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 GJA6P-201ENST00000415117 1042 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC073310.1-201ENST00000423226 1033 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 DEFB130D-201ENST00000426866 237 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RPL7AP6-201ENST00000477943 801 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RN7SL826P-201ENST00000479724 288 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 HMGB1P38-201ENST00000490557 577 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC010374.1-201ENST00000503762 1237 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RNA5SP446-201ENST00000515955 82 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC118942.1-201ENST00000529674 1035 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC022832.1-201ENST00000530718 645 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AP003717.3-201ENST00000544832 1180 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC010735.1-201ENST00000567305 1026 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 RPL7P50-201ENST00000600588 727 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC087763.1-201ENST00000603391 286 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC069431.2-201ENST00000604149 1099 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 OR7A19P-201ENST00000608051 733 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AP001521.2-201ENST00000608772 546 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC011472.4-201ENST00000615848 491 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC131238.1-201ENST00000617135 328 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 LINC00901.1-201ENST00000617252 152 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 MIR6730-201ENST00000622213 67 ntBASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A1Q8WWI5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms