Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST2Q8NFU1 CASC19-206ENST00000641028 1430 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC008549.2-201ENST00000333482 706 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 SNORD113.2-201ENST00000364166 89 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RNU6-468P-201ENST00000384003 109 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC136624.1-201ENST00000400791 413 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AP000580.1-201ENST00000404439 358 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 OR51B3P-201ENST00000412287 913 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 HMGB3P10-201ENST00000434734 572 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RPL7P33-201ENST00000444159 742 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RPL21P18-201ENST00000469899 480 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RN7SL481P-201ENST00000477764 299 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC111000.3-201ENST00000508057 576 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 SNORA31.13-201ENST00000516624 135 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 OR8X1P-201ENST00000534542 869 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC023825.1-201ENST00000566704 1030 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC106734.1-201ENST00000568646 663 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RN7SL435P-201ENST00000584418 282 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC073091.2-201ENST00000603205 907 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC023762.1-201ENST00000603280 584 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC112503.1-201ENST00000608436 391 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AL050303.3-201ENST00000613704 284 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AC126544.2-201ENST00000625174 749 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 AL445487.1-201ENST00000415694 1580 ntBASIC5.06□□□□□ -1.6
BEST2Q8NFU1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
BEST2Q8NFU1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 HSPD1P14-201ENST00000432666 1618 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 HMGB3P19-201ENST00000403971 560 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL359643.1-201ENST00000404109 423 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ARL4AP5-201ENST00000404372 599 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC008173.1-201ENST00000418901 264 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC068287.1-201ENST00000430283 295 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 MRPL48P1-201ENST00000445390 636 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL606517.1-201ENST00000446914 387 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 HSPE1P22-201ENST00000456856 327 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC104982.1-201ENST00000478775 574 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 RPL36AP41-201ENST00000493820 306 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC010374.1-201ENST00000503762 1237 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL049870.4-201ENST00000555741 486 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC091057.3-201ENST00000602684 733 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC124016.2-201ENST00000610058 665 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AP004607.9-201ENST00000618202 316 ntBASIC5.05□□□□□ -1.6
BEST2Q8NFU1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms