Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AL359265.2-201ENST00000434367 631 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AL356535.1-201ENST00000440335 398 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 RN7SL459P-201ENST00000481078 302 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC069499.1-201ENST00000489433 509 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC087468.1-201ENST00000604365 630 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AC067838.1-201ENST00000606064 577 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 MIR6853-201ENST00000619642 74 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 MIR6810-201ENST00000622701 70 ntBASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC112Q8NEF3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 RNA5SP191-201ENST00000362585 102 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AP000357.1-201ENST00000409926 1165 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 EIF1P3-201ENST00000423841 334 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 EIF2S2P3-201ENST00000428356 999 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AP001324.1-201ENST00000428553 399 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 CNOT7P1-201ENST00000429006 852 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 RPL21P133-201ENST00000443666 476 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 NPM1P6-201ENST00000521088 871 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC009704.2-201ENST00000618739 483 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC021106.3-201ENST00000623925 531 ntBASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC112Q8NEF3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 MIR3065-201ENST00000390137 79 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC004074.1-201ENST00000421810 1063 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 RPL10P17-201ENST00000453852 316 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 snoU13.1-201ENST00000459157 104 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC010326.1-201ENST00000462726 602 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 RN7SL385P-201ENST00000468873 276 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 BNIP3P41-201ENST00000503774 571 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC006064.5-201ENST00000541782 248 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC141257.3-201ENST00000572906 215 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC098935.2-201ENST00000604222 466 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 MIR486-1-201ENST00000612171 68 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 AC078899.5-201ENST00000612475 178 ntBASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC112Q8NEF3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms