Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DNAJB5P1-201ENST00000454004 806 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RPL30P15-201ENST00000457129 321 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC092324.1-201ENST00000468671 324 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC128716.1-201ENST00000475129 166 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 GAPDHP39-201ENST00000481866 979 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RN7SL382P-201ENST00000482631 282 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 EIF4EP3-201ENST00000498782 656 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC018645.1-201ENST00000505003 109 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RNY3P15-201ENST00000516297 97 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 SNORD60.2-201ENST00000516883 86 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RN7SKP147-201ENST00000517154 244 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 HMGB1P19-201ENST00000517578 577 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC079075.1-201ENST00000559543 878 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC104687.2-201ENST00000604442 342 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC141273.2-201ENST00000618989 130 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC092650.2-201ENST00000619984 902 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC243312.2-201ENST00000623340 601 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC073488.9-201ENST00000631601 754 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 Z97989.1-201ENST00000531702 2421 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AL049641.1-201ENST00000441055 1948 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 SPATA31C1-201ENST00000420021 3895 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 AC104837.1-201ENST00000444644 1587 ntBASIC6.91□□□□□ -1.3
NPAS3Q8IXF0 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AL442128.2-201ENST00000620246 1824 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 Y_RNA.396-201ENST00000383949 103 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RNU6-1158P-201ENST00000391167 107 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RPS4XP8-201ENST00000402039 771 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 MIR1204-201ENST00000408388 67 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 MTATP6P18-201ENST00000417994 673 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AL589872.1-201ENST00000426602 288 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC107398.1-201ENST00000486904 505 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC083904.1-201ENST00000487828 231 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RPL7P38-201ENST00000488396 739 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RPL17P2-201ENST00000491913 451 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AK3P4-201ENST00000504283 583 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC022861.1-201ENST00000522981 663 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC022882.1-201ENST00000532142 501 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AP004609.2-201ENST00000532177 190 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC013828.2-201ENST00000532487 235 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC018558.5-201ENST00000565840 952 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC141257.3-201ENST00000572906 215 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 MIR4666A-201ENST00000580160 79 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 RNF138P2-201ENST00000603490 592 ntBASIC6.9□□□□□ -1.3
NPAS3Q8IXF0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms