Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RN7SL177P-201ENST00000476596 299 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 UBA52P3-201ENST00000491303 382 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC093870.1-201ENST00000506837 213 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 HMGB1P42-201ENST00000532126 553 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL355375.2-201ENST00000574825 175 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL133173.2-201ENST00000614270 90 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL031658.2-201ENST00000616850 651 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL354702.2-202ENST00000641481 890 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC009237.3-203ENST00000442128 3551 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AP000473.2-201ENST00000602659 1537 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC104162.1-201ENST00000430831 2382 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 Y_RNA.132-201ENST00000363421 102 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 SNORA63C-201ENST00000364578 129 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RPL9P21-201ENST00000392269 505 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL357752.1-201ENST00000412817 349 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 GPM6BP2-201ENST00000432046 144 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL590128.1-201ENST00000433407 286 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 GPM6BP1-201ENST00000446387 144 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 HMGB1P7-201ENST00000450921 612 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 BX842559.2-201ENST00000451418 605 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC233279.1-201ENST00000455300 423 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RPS15AP1-201ENST00000457423 391 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RN7SL254P-201ENST00000460609 284 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RN7SL174P-201ENST00000475578 289 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 COX6B1P2-201ENST00000489624 230 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 PABPC1P1-201ENST00000506347 591 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 Vault.3-201ENST00000516676 95 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RNU6-835P-201ENST00000516974 104 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC051619.2-201ENST00000559063 397 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC055876.1-202ENST00000567053 138 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 GLYATL1P2-202ENST00000588046 902 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC114477.1-201ENST00000605097 605 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC138649.5-201ENST00000637456 137 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AL512329.1-201ENST00000404600 1592 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 LINC00622-201ENST00000562811 1570 ntBASIC7.07□□□□□ -1.28
RNF135Q8IUD6 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RNF135Q8IUD6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF135Q8IUD6 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms