Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC044913.1-201ENST00000557200 430 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC069304.3-201ENST00000603938 1084 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL392112.1-201ENST00000605115 829 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AP005432.2-201ENST00000608162 586 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC099676.1-201ENST00000608886 657 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AL157392.4-201ENST00000609756 345 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC093799.2-201ENST00000610062 578 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 EIF3FP1-201ENST00000613970 806 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC123767.1-202ENST00000620407 817 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 AC068787.1-201ENST00000623908 691 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR1S1-201ENST00000624470 978 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 MAPK10-304ENST00000641341 3984 ntBASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
LRRTM4Q86VH4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC005005.4-201ENST00000623789 16698 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 RNU4-44P-201ENST00000363050 141 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 RNU1-87P-201ENST00000363727 170 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 RNA5SP455-201ENST00000365190 119 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SNORA2.3-201ENST00000383920 135 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SNORA66-201ENST00000384792 133 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 PAICSP7-201ENST00000419829 962 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC007394.1-201ENST00000421941 531 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 IPMKP1-201ENST00000425988 855 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ELOCP6-201ENST00000429066 328 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ELOCP12-201ENST00000458706 328 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 GAPDHP39-201ENST00000481866 979 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC016559.2-201ENST00000510759 359 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 SNORD116-26-201ENST00000516006 96 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC023632.1-201ENST00000518463 375 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 OR7E128P-201ENST00000532736 1024 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC090515.3-201ENST00000560431 315 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC009852.2-201ENST00000567898 485 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC022884.2-201ENST00000578535 580 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 MIR4666A-201ENST00000580160 79 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 MTCO2P2-201ENST00000591258 225 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AL160237.3-201ENST00000604114 1013 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AL035461.2-201ENST00000619201 524 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ZNF663P-202ENST00000641770 1131 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 PCAT14-202ENST00000627127 3935 ntBASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRRTM4Q86VH4 AL355852.1-201ENST00000454081 1771 ntBASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 RNU4-51P-201ENST00000364206 140 ntBASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRTM4Q86VH4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms