Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 OR7H2P-201ENST00000513483 306 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RNA5SP464-201ENST00000516251 108 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RNU6-334P-201ENST00000517072 102 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC090515.3-201ENST00000560431 315 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC090751.1-201ENST00000566966 267 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC091042.1-201ENST00000579213 173 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC123768.4-201ENST00000616244 701 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC095038.2-201ENST00000621464 1070 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC138907.10-201ENST00000623708 983 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AP000720.1-201ENST00000625091 483 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AL590396.2-201ENST00000636511 1041 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC107068.1-201ENST00000563286 4218 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC100871.1-201ENST00000507871 1456 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 RNA5SP345-201ENST00000410646 108 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 TBCAP2-201ENST00000416175 326 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL138878.2-201ENST00000440581 1241 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 OR1H1P-201ENST00000448731 937 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 SLC25A18P1-201ENST00000449385 454 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL935212.3-201ENST00000450729 284 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 RPL23AP71-201ENST00000470966 469 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC010683.1-201ENST00000473673 378 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 SETP6-201ENST00000479329 568 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL161747.1-201ENST00000480068 358 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 OR5H3P-201ENST00000502817 919 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC068446.3-201ENST00000555285 382 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 SETP1-201ENST00000556014 845 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC106734.1-201ENST00000568646 663 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC090312.1-201ENST00000580637 348 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC125494.3-201ENST00000602759 455 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 MTATP6P2-201ENST00000603319 678 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC073569.3-201ENST00000619055 682 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL022401.1-201ENST00000619498 108 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 U6.107-201ENST00000637108 79 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 AL672167.1-203ENST00000641299 2975 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 CASC19-206ENST00000641028 1430 ntBASIC4.97□□□□□ -1.61
PRPF39Q86UA1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PRPF39Q86UA1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF39Q86UA1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.61
PRPF39Q86UA1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.96□□□□□ -1.61
PRPF39Q86UA1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF39Q86UA1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF39Q86UA1 AC093535.2-201ENST00000624769 2326 ntBASIC4.96□□□□□ -1.61
PRPF39Q86UA1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC008758.3-201ENST00000507003 1829 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 MTATP6P31-201ENST00000406985 692 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 RNA5SP113-201ENST00000410486 84 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms