Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR1E3-201ENST00000575608 948 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MIR3189-201ENST00000578735 73 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MIR4503-201ENST00000582187 83 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AL589863.1-201ENST00000595383 631 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 DYNLL1P1-201ENST00000595442 269 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC007621.1-201ENST00000604544 437 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC011891.2-201ENST00000604949 397 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC113139.1-201ENST00000605049 239 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MIR7159-201ENST00000620587 66 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AC092692.1-201ENST00000623625 2595 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 MTND4P1-201ENST00000457501 1466 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATG4DQ86TL0 AP000547.3-204ENST00000588548 2523 ntBASIC5.75□□□□□ -1.49
ATG4DQ86TL0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AP001350.1-201ENST00000601906 1524 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL118496.1-201ENST00000440201 1812 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC011155.1-201ENST00000316512 456 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MIR369-201ENST00000362155 70 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RNU6-451P-201ENST00000362921 107 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RNU6-1309P-201ENST00000363305 108 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RNA5SP279-201ENST00000365513 117 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 LCN1P2-201ENST00000372030 223 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 SNORA51.12-201ENST00000384448 134 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RPL23AP29-201ENST00000397284 453 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL161909.1-201ENST00000397390 712 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MIR1275-201ENST00000408770 80 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RNA5SP118-201ENST00000410385 109 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MTCO2P5-201ENST00000422621 426 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC127526.2-201ENST00000426436 775 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 ISCA1P6-201ENST00000427740 390 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MTND6P13-201ENST00000443510 523 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 COX4I1P2-201ENST00000447446 547 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 SUMO1P2-201ENST00000452524 304 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 CALM1P2-201ENST00000452941 448 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RPS27AP3-201ENST00000453803 454 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 VPS25P1-201ENST00000455691 508 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC019084.1-201ENST00000457337 432 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RN7SL39P-201ENST00000462264 297 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RN7SL168P-201ENST00000463821 279 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RPL7P38-201ENST00000488396 739 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 HMGN1P16-201ENST00000508308 283 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC010343.2-201ENST00000510162 224 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 PTP4A1P4-201ENST00000512479 322 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC083923.1-201ENST00000523708 376 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 BRD9P1-201ENST00000529855 560 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 OR4H6P-201ENST00000563771 921 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC136618.2-201ENST00000575091 400 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC026898.1-201ENST00000586404 571 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC005332.4-201ENST00000592752 579 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL596327.1-201ENST00000603629 213 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 SNRPGP17-201ENST00000603780 214 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 AL683826.1-201ENST00000624104 627 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms