Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 RPL12P25-202ENST00000598100 674 ntBASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 AC078899.5-201ENST00000612475 178 ntBASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 AL021997.2-201ENST00000615674 271 ntBASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 MIR6730-201ENST00000622213 67 ntBASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HIST2H3AQ71DI3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC103591.2-201ENST00000265259 766 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 RNA5SP175-201ENST00000364275 119 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 HSPD1P16-201ENST00000402302 394 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC119751.6-201ENST00000416712 186 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 RPL12P28-201ENST00000430852 489 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 NFYAP1-201ENST00000431953 972 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 ELOCP18-201ENST00000434209 337 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AL133477.1-201ENST00000457472 514 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC111000.3-201ENST00000508057 576 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 RN7SKP92-201ENST00000517266 244 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AL109766.1-201ENST00000555080 552 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 CYP4A43P-201ENST00000568156 121 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AC002044.3-201ENST00000623314 541 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 BX005019.1-201ENST00000561881 1810 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 AL031985.3-201ENST00000565390 2449 ntBASIC3.79□□□□□ -1.8
HIST2H3AQ71DI3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 MIR331-201ENST00000362302 94 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RNU6-398P-201ENST00000384143 109 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 JKAMPP1-201ENST00000413804 919 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RPS23P10-201ENST00000416185 486 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC069213.2-201ENST00000420238 366 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RPS27AP7-201ENST00000422792 455 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 EIF1P3-201ENST00000423841 334 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 MTND4LP13-201ENST00000425022 298 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 HLA-N-201ENST00000437516 135 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RPSAP41-201ENST00000439695 860 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RPL7P22-201ENST00000466005 733 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC105918.1-201ENST00000474399 838 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RN7SL205P-201ENST00000490174 284 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC104164.2-201ENST00000496953 495 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC108145.1-201ENST00000503770 153 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 BNIP3P41-201ENST00000503774 571 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AK3P4-201ENST00000504283 583 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 UBTFL9-201ENST00000534504 1148 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC068831.4-201ENST00000556118 109 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC018552.3-201ENST00000567416 561 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC093765.1-201ENST00000603758 881 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC113403.1-201ENST00000604910 193 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC025175.1-201ENST00000606482 759 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AC004948.1-201ENST00000609858 672 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 AL359715.5-201ENST00000623431 443 ntBASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST2H3AQ71DI3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.81
HIST2H3AQ71DI3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HIST2H3AQ71DI3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms