Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 Z97832.1-201ENST00000402490 328 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AP002530.1-201ENST00000405705 684 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 TBCAP2-201ENST00000416175 326 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 RPS27P18-201ENST00000431701 247 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC093414.1-201ENST00000434712 514 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 RPS26P40-201ENST00000435209 294 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC092647.3-201ENST00000443044 633 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL137845.2-201ENST00000444292 988 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AP000942.1-201ENST00000463969 747 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 RPSAP50-201ENST00000481955 852 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 PPM1AP1-201ENST00000502740 1135 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 RNA5SP249-201ENST00000516127 99 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AP000916.1-201ENST00000533869 835 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC074029.1-201ENST00000552531 1044 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC026741.1-201ENST00000605892 482 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL021707.7-201ENST00000607991 416 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC021851.1-201ENST00000608537 1082 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC007497.1-201ENST00000610421 561 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL669942.2-201ENST00000620352 697 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 CR381572.2-201ENST00000624852 397 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AP000720.1-201ENST00000625091 483 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AL353662.3-201ENST00000625131 237 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.36□□□□□ -1.71
NHLRC1Q6VVB1 AC073055.1-201ENST00000456901 1621 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 NEAT1-202ENST00000501122 22743 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RNA5SP123-201ENST00000363244 119 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AL109941.1-201ENST00000401925 229 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 BX664727.1-201ENST00000416024 466 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC093162.1-201ENST00000419682 124 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 EIF4HP2-201ENST00000424380 563 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CKS1BP6-201ENST00000424932 240 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RPL7P4-203ENST00000430239 730 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 TRY2P-201ENST00000448860 689 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RPL7P31-201ENST00000450192 724 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC093166.2-201ENST00000455969 1017 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AL445433.1-201ENST00000457507 257 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC096992.1-201ENST00000459808 709 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 GYG1P1-201ENST00000460864 698 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RN7SL808P-201ENST00000496066 299 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC140172.1-201ENST00000502928 141 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 ARL4AP1-201ENST00000503220 705 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 FTH1P24-201ENST00000503502 462 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC098799.3-201ENST00000506095 438 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 RNU6-334P-201ENST00000517072 102 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 HMGN2P6-201ENST00000551091 273 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 CYCSP40-201ENST00000575927 294 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 MIR6798-201ENST00000612887 67 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC018445.2-201ENST00000622987 260 ntBASIC4.35□□□□□ -1.71
NHLRC1Q6VVB1 AC092608.3-201ENST00000625017 386 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms