Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL12P34-201ENST00000424532 479 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC009238.2-201ENST00000431026 355 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR10R1P-201ENST00000441524 1141 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC008885.2-201ENST00000509506 930 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC38Q502W7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC126177.5-201ENST00000549599 178 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 BPTFP1-201ENST00000579209 492 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC011840.5-201ENST00000582125 771 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 AP001160.4-201ENST00000596971 382 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL583856.2-201ENST00000606298 543 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 SNORD91B-202ENST00000608459 222 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 BX323046.1-201ENST00000610145 535 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AC108359.1-201ENST00000616451 1211 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL078595.3-201ENST00000623815 1166 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 AL109659.3-201ENST00000624985 950 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 CYP4F35P-202ENST00000636121 390 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
CCDC38Q502W7 SGO1P1-201ENST00000603525 1447 ntBASIC5.3□□□□□ -1.56
CCDC38Q502W7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC38Q502W7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC38Q502W7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AL021331.1-201ENST00000402817 582 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 U3.32-201ENST00000408116 212 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC079355.1-201ENST00000421770 223 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 MTCO2P17-201ENST00000424336 677 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 C1DP1-201ENST00000426049 402 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 RPL12P46-201ENST00000436610 195 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 HMGB3P6-201ENST00000444896 598 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC112206.1-201ENST00000468416 477 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 OR52A4P-201ENST00000472867 958 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC034205.1-201ENST00000520621 638 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 OR8G5-201ENST00000524943 1041 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 NF1P5-201ENST00000588287 448 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC109309.2-201ENST00000612597 332 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC009318.3-201ENST00000616916 503 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC118658.2-201ENST00000618697 459 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC010975.3-201ENST00000618727 978 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 AC136428.4-201ENST00000634254 1155 ntBASIC5.29□□□□□ -1.56
CCDC38Q502W7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC38Q502W7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC38Q502W7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 OR1L1-202ENST00000373686 1083 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 OR8V1P-201ENST00000395193 873 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 ANAPC10P1-201ENST00000395991 556 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC009804.1-201ENST00000400949 179 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL390316.1-201ENST00000406279 553 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms