Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AC023043.4-201ENST00000612081 449 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 MIR492-201ENST00000638676 116 ntBASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM1Q2M3G4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 OR51H2P-202ENST00000641424 3046 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 SPRR2C-201ENST00000290702 219 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC017079.1-201ENST00000333650 415 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 RNU6-225P-201ENST00000384613 103 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC240504.1-201ENST00000395709 845 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AL132765.1-201ENST00000434165 553 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 RPS7P7-201ENST00000463499 571 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC037198.2-201ENST00000478845 733 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 RPL23AP37-201ENST00000479658 549 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 PGBD4P4-201ENST00000509673 613 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 RNA5SP360-201ENST00000516555 118 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC123786.2-201ENST00000603459 275 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC090953.1-201ENST00000604305 1092 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AP002360.3-201ENST00000607673 710 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 OR7M1P-201ENST00000608946 533 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 AC116447.1-201ENST00000613153 453 ntBASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM1Q2M3G4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 RN7SKP235-201ENST00000410662 305 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 NMNAT1P2-201ENST00000435192 860 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 RPL7P33-201ENST00000444159 742 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 AC239367.2-201ENST00000447309 705 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 APOOP2-201ENST00000461561 539 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 MTND3P6-201ENST00000485242 339 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 RPL35P6-201ENST00000490024 372 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 RPS4XP18-201ENST00000495480 763 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 TVP23BP1-201ENST00000557500 617 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 AL122126.1-201ENST00000546905 1318 ntBASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM1Q2M3G4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AL356095.1-201ENST00000417217 199 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 AL157831.1-201ENST00000426134 473 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 COX6CP15-201ENST00000426313 211 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CDY14P-201ENST00000431260 1014 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CDY12P-201ENST00000440679 1015 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 CDY13P-201ENST00000445813 1015 ntBASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM1Q2M3G4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms