Protein–RNA interactions for Protein: Q15836

VAMP3, Vesicle-associated membrane protein 3, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3Q15836 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 EI24P4-201ENST00000423683 1078 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 Z77249.1-201ENST00000444622 1175 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC3.32□□□□□ -1.88
VAMP3Q15836 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.32□□□□□ -1.88
VAMP3Q15836 RN7SL790P-201ENST00000474043 298 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 PPIAP19-201ENST00000486414 492 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 HMGB1P44-201ENST00000508597 572 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC109481.1-201ENST00000509173 282 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.32□□□□□ -1.88
VAMP3Q15836 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 OLR1-209ENST00000543993 822 ntTSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC002519.2-203ENST00000567043 837 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 MIR3690-201ENST00000580266 75 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC069366.1-201ENST00000583159 838 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC112230.1-201ENST00000604342 547 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AL591222.2-201ENST00000604443 754 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC012603.1-201ENST00000606424 528 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AC090425.2-201ENST00000608818 501 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 MIR6809-201ENST00000612189 116 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 AL591926.8-201ENST00000616876 211 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 MIR6807-201ENST00000621968 92 ntBASIC3.32□□□□□ -1.88
VAMP3Q15836 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.32□□□□□ -1.88
VAMP3Q15836 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VAMP3Q15836 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
VAMP3Q15836 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VAMP3Q15836 AC026951.1-201ENST00000559530 2459 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 NSRP1P1-201ENST00000444067 1693 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VAMP3Q15836 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 RPS4XP5-202ENST00000449995 1334 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 Z86062.1-201ENST00000406773 777 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 RN7SKP39-201ENST00000410773 322 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 RPL31P2-201ENST00000413849 377 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC005517.2-201ENST00000424673 553 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 GSTM5P1-201ENST00000434751 660 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC3.31□□□□□ -1.88
VAMP3Q15836 HMGB1P12-201ENST00000438594 598 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC097499.1-201ENST00000444277 208 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC007383.1-201ENST00000445875 636 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 RNU7-170P-201ENST00000459303 61 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 RPS20P4-201ENST00000461659 355 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC092754.2-201ENST00000463506 460 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 RPL7L1P8-201ENST00000469911 741 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 HMGB1P38-201ENST00000490557 577 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC3.31□□□□□ -1.88
VAMP3Q15836 NENFP3-201ENST00000503735 313 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC108157.1-201ENST00000510511 539 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC026688.1-201ENST00000520639 1168 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP3Q15836 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 NOP56P3-201ENST00000549457 385 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC010735.1-201ENST00000567305 1026 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC002310.3-201ENST00000569728 723 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 MIR4258-201ENST00000580920 91 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC008966.2-201ENST00000606157 453 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AL512624.1-201ENST00000613638 469 ntBASIC3.31□□□□□ -1.88
VAMP3Q15836 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP3Q15836 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP3Q15836 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms