Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.4□□□□□ -1.71
SCN1BQ07699 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 SNORD95-201ENST00000579879 68 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC008814.1-201ENST00000603797 406 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AL589674.2-201ENST00000604304 337 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC010680.4-201ENST00000605334 543 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.4□□□□□ -1.71
SCN1BQ07699 SNX18P1Y-201ENST00000616231 511 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AL121890.3-201ENST00000618494 516 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC026124.2-201ENST00000621847 656 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC005086.4-201ENST00000623065 213 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC068880.4-201ENST00000623082 495 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC009452.1-201ENST00000640823 606 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN1BQ07699 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN1BQ07699 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 MTND4P8-201ENST00000514997 1362 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC092747.4-201ENST00000620519 1861 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC009951.1-201ENST00000623674 2614 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 IRF5P1-201ENST00000504852 2164 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SCN1BQ07699 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SCN1BQ07699 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 LAP3P1-201ENST00000403648 294 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 RN7SKP59-201ENST00000410520 314 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 RNU6-272P-201ENST00000411028 104 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 VDAC1P9-201ENST00000412766 841 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC008065.1-201ENST00000428525 348 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 YWHAZP8-201ENST00000436935 731 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN1BQ07699 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 snoU13.7-201ENST00000459220 104 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AL133445.1-201ENST00000467051 452 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 RPL21P18-201ENST00000469899 480 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 RN7SL717P-201ENST00000478343 297 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 RPS27P23-201ENST00000487608 251 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 RN7SL558P-201ENST00000497468 299 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC104109.1-201ENST00000498563 436 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC097173.1-201ENST00000505862 819 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC147055.3-201ENST00000510547 851 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 MTCO3P27-201ENST00000514397 196 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 PRELID3BP4-201ENST00000515476 571 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN1BQ07699 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC079075.1-201ENST00000559543 878 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AP005119.2-201ENST00000579735 1105 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC008687.2-201ENST00000597865 520 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AC091979.2-201ENST00000607514 214 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AL359535.1-201ENST00000612100 1087 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC109309.2-201ENST00000612597 332 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 RNA5SP440-201ENST00000612665 119 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 AC006249.1-201ENST00000621223 471 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.39□□□□□ -1.71
SCN1BQ07699 AL590396.4-201ENST00000636779 956 ntBASIC4.39□□□□□ -1.71
SCN1BQ07699 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN1BQ07699 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN1BQ07699 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms