Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 AC092851.1-201ENST00000535964 478 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 AC093249.4-201ENST00000564755 259 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.77□□□□□ -1.81
UBA52P62987 MIR3939-201ENST00000582614 106 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 AL133338.2-201ENST00000604292 736 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC010201.1-201ENST00000605051 540 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC245389.2-201ENST00000616023 576 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AC242843.1-201ENST00000618702 573 ntBASIC3.77□□□□□ -1.81
UBA52P62987 AP003499.2-201ENST00000624100 483 ntBASIC3.77□□□□□ -1.81
UBA52P62987 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 ZNF137P-201ENST00000456718 1920 ntBASIC3.77□□□□□ -1.81
UBA52P62987 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 AP000756.2-201ENST00000624168 2567 ntBASIC3.77□□□□□ -1.81
UBA52P62987 CCT8P1-201ENST00000413611 1657 ntBASIC3.77□□□□□ -1.81
UBA52P62987 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
UBA52P62987 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.77□□□□□ -1.81
UBA52P62987 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBA52P62987 AC107027.3-201ENST00000565095 3473 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC006971.1-201ENST00000407916 4486 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC099654.3-201ENST00000447087 1546 ntBASIC3.76□□□□□ -1.81
UBA52P62987 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.76□□□□□ -1.81
UBA52P62987 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 RNA5SP322-201ENST00000363617 119 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC019155.1-201ENST00000382242 574 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.76□□□□□ -1.81
UBA52P62987 OR6C69P-201ENST00000394268 893 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RN7SKP263-201ENST00000411194 309 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AMD1P2-201ENST00000412936 992 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.76□□□□□ -1.81
UBA52P62987 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 AL645608.4-201ENST00000423619 154 ntBASIC3.76□□□□□ -1.81
UBA52P62987 NDUFA5P1-201ENST00000433858 341 ntBASIC3.76□□□□□ -1.81
UBA52P62987 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.76□□□□□ -1.81
UBA52P62987 CBX1P1-201ENST00000440184 427 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 RPL23AP24-201ENST00000458203 385 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC025164.1-201ENST00000496249 478 ntBASIC3.76□□□□□ -1.81
UBA52P62987 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 AC093824.1-201ENST00000508796 343 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RNA5SP497-201ENST00000516081 97 ntBASIC3.76□□□□□ -1.81
UBA52P62987 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.76□□□□□ -1.81
UBA52P62987 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 AC021483.2-201ENST00000567415 758 ntBASIC3.76□□□□□ -1.81
UBA52P62987 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.76□□□□□ -1.81
UBA52P62987 AC010857.1-201ENST00000606398 594 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC012603.1-201ENST00000606424 528 ntBASIC3.76□□□□□ -1.81
UBA52P62987 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 AL133243.1-201ENST00000614487 366 ntBASIC3.76□□□□□ -1.81
UBA52P62987 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.76□□□□□ -1.81
UBA52P62987 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 RAD17P1-201ENST00000418130 2042 ntBASIC3.76□□□□□ -1.81
UBA52P62987 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.76□□□□□ -1.81
UBA52P62987 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBA52P62987 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 FAM35DP-201ENST00000323387 2712 ntBASIC3.76□□□□□ -1.81
UBA52P62987 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
UBA52P62987 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
UBA52P62987 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
UBA52P62987 ZFRP1-201ENST00000457579 2970 ntBASIC3.75□□□□□ -1.81
UBA52P62987 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.75□□□□□ -1.81
UBA52P62987 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.75□□□□□ -1.81
UBA52P62987 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 OR4K17-201ENST00000315543 1032 ntBASIC3.75□□□□□ -1.81
UBA52P62987 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 RNU6-984P-201ENST00000363236 109 ntBASIC3.75□□□□□ -1.81
UBA52P62987 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBA52P62987 RNU1-89P-201ENST00000384592 164 ntBASIC3.75□□□□□ -1.81
UBA52P62987 SNORA57.1-201ENST00000391227 145 ntBASIC3.75□□□□□ -1.81
UBA52P62987 Z98745.1-201ENST00000402553 494 ntBASIC3.75□□□□□ -1.81
UBA52P62987 AC062016.2-201ENST00000420950 676 ntBASIC3.75□□□□□ -1.81
UBA52P62987 RPL7P4-203ENST00000430239 730 ntBASIC3.75□□□□□ -1.81
UBA52P62987 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.75□□□□□ -1.81
UBA52P62987 AC239809.1-201ENST00000450470 217 ntBASIC3.75□□□□□ -1.81
UBA52P62987 AC079168.2-201ENST00000453977 416 ntBASIC3.75□□□□□ -1.81
UBA52P62987 MTND4LP2-201ENST00000502312 285 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms