Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU7-136P-201ENST00000458819 69 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 ACTR3P3-201ENST00000480448 893 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC112204.1-201ENST00000502591 103 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC093824.1-201ENST00000508796 343 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 RNU6-528P-201ENST00000516926 100 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC008127.2-201ENST00000549925 1075 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.56□□□□□ -1.52
GFRA1P56159 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 CYCSP38-201ENST00000559840 322 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC008507.3-201ENST00000585753 472 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC009977.1-201ENST00000586015 570 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 NPIPB1P-202ENST00000588786 828 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 PSMA6P4-201ENST00000603247 718 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC004067.1-201ENST00000608733 700 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC078899.5-201ENST00000612475 178 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC104010.1-201ENST00000616889 150 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
GFRA1P56159 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 AC007342.5-201ENST00000571340 2142 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 OR11H4-201ENST00000315409 1082 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 RNU1-134P-201ENST00000362935 165 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 RNU6-777P-201ENST00000364265 104 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 RNU6-921P-201ENST00000384361 107 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 MIR130B-202ENST00000385018 82 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AL512422.1-201ENST00000407033 553 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 MIR1277-201ENST00000408536 78 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 COX6CP17-201ENST00000421389 185 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 BX890604.2-201ENST00000427883 474 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 NPM1P24-201ENST00000428039 894 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC146507.1-201ENST00000468335 354 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC006511.1-201ENST00000470614 315 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC010342.1-201ENST00000514047 877 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 snoU109.6-201ENST00000516831 118 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.55□□□□□ -1.52
GFRA1P56159 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.55□□□□□ -1.52
GFRA1P56159 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.55□□□□□ -1.52
GFRA1P56159 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.55□□□□□ -1.52
GFRA1P56159 HSPE1P3-201ENST00000559254 309 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC090515.3-201ENST00000560431 315 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.55□□□□□ -1.52
GFRA1P56159 SULT1C2P2-201ENST00000562517 294 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms