Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.98□□□□□ -1.61
GPC3P51654 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC3P51654 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.98□□□□□ -1.61
GPC3P51654 AC010627.1-201ENST00000503819 1294 ntBASIC4.98□□□□□ -1.61
GPC3P51654 SMARCE1P4-201ENST00000523647 241 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.98□□□□□ -1.61
GPC3P51654 AC074029.2-201ENST00000551045 634 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.98□□□□□ -1.61
GPC3P51654 PARP1P2-201ENST00000556806 195 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AC022884.3-201ENST00000579571 248 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC3P51654 KPNA2P3-201ENST00000584190 848 ntBASIC4.98□□□□□ -1.61
GPC3P51654 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.98□□□□□ -1.61
GPC3P51654 AP001160.4-201ENST00000596971 382 ntBASIC4.98□□□□□ -1.61
GPC3P51654 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC3P51654 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.98□□□□□ -1.61
GPC3P51654 BNIP3P7-201ENST00000605641 516 ntBASIC4.98□□□□□ -1.61
GPC3P51654 SNORD91B-202ENST00000608459 222 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AL391834.1-201ENST00000609609 560 ntBASIC4.98□□□□□ -1.61
GPC3P51654 LINC00901.1-201ENST00000617252 152 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AC011944.2-201ENST00000624440 683 ntBASIC4.98□□□□□ -1.61
GPC3P51654 AC119674.1-220ENST00000641502 1048 ntBASIC4.98□□□□□ -1.61
GPC3P51654 LINC01808-202ENST00000641680 1116 ntBASIC4.98□□□□□ -1.61
GPC3P51654 OR52H1-202ENST00000641796 1061 ntBASIC4.98□□□□□ -1.61
GPC3P51654 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC3P51654 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GPC3P51654 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC3P51654 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
GPC3P51654 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC3P51654 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC3P51654 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC3P51654 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC114546.3-201ENST00000623582 1734 ntBASIC4.97□□□□□ -1.61
GPC3P51654 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC3P51654 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC3P51654 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GPC3P51654 RNU1-130P-201ENST00000363930 160 ntBASIC4.97□□□□□ -1.61
GPC3P51654 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GPC3P51654 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC3P51654 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.97□□□□□ -1.61
GPC3P51654 AL357520.1-201ENST00000441557 453 ntBASIC4.97□□□□□ -1.61
GPC3P51654 RPL23AP43-201ENST00000446445 471 ntBASIC4.97□□□□□ -1.61
GPC3P51654 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC3P51654 RPS4XP18-201ENST00000495480 763 ntBASIC4.97□□□□□ -1.61
GPC3P51654 CDH12P2-201ENST00000504393 298 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC113430.1-201ENST00000506872 718 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.97□□□□□ -1.61
GPC3P51654 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.97□□□□□ -1.61
GPC3P51654 RNA5SP446-201ENST00000515955 82 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC010476.1-201ENST00000519111 851 ntBASIC4.97□□□□□ -1.61
GPC3P51654 PDCD5P1-201ENST00000543528 309 ntBASIC4.97□□□□□ -1.61
GPC3P51654 DYNLL1P4-201ENST00000549314 266 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC068446.3-201ENST00000555285 382 ntBASIC4.97□□□□□ -1.61
GPC3P51654 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.97□□□□□ -1.61
GPC3P51654 SS18L2P2-201ENST00000583960 235 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AC010200.2-201ENST00000605098 235 ntBASIC4.97□□□□□ -1.61
GPC3P51654 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 AC020634.1-201ENST00000608701 549 ntBASIC4.97□□□□□ -1.61
GPC3P51654 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 OR2L1P-202ENST00000641567 1023 ntBASIC4.97□□□□□ -1.61
GPC3P51654 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC3P51654 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC3P51654 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC3P51654 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC3P51654 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GPC3P51654 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC3P51654 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
GPC3P51654 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
GPC3P51654 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.96□□□□□ -1.61
GPC3P51654 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC3P51654 LINC00622-201ENST00000562811 1570 ntBASIC4.96□□□□□ -1.62
GPC3P51654 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
GPC3P51654 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC3P51654 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GPC3P51654 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC3P51654 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
GPC3P51654 OR4K17-201ENST00000315543 1032 ntBASIC4.96□□□□□ -1.62
GPC3P51654 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC3P51654 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC3P51654 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC3P51654 CYCSP10-201ENST00000417973 294 ntBASIC4.96□□□□□ -1.62
GPC3P51654 RAD23BP1-201ENST00000421404 1227 ntBASIC4.96□□□□□ -1.62
GPC3P51654 RPS29P17-201ENST00000430795 166 ntBASIC4.96□□□□□ -1.62
GPC3P51654 GSTA7P-201ENST00000438425 448 ntBASIC4.96□□□□□ -1.62
GPC3P51654 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.96□□□□□ -1.62
GPC3P51654 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GPC3P51654 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC3P51654 AC109327.1-201ENST00000471666 403 ntBASIC4.96□□□□□ -1.62
GPC3P51654 MTND6P6-201ENST00000478031 263 ntBASIC4.96□□□□□ -1.62
GPC3P51654 AC021087.2-201ENST00000504656 1203 ntBASIC4.96□□□□□ -1.62
GPC3P51654 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.96□□□□□ -1.62
GPC3P51654 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC3P51654 HMGB1P47-201ENST00000511281 589 ntBASIC4.96□□□□□ -1.62
GPC3P51654 RNU6-491P-201ENST00000516099 110 ntBASIC4.96□□□□□ -1.62
GPC3P51654 AC104997.1-201ENST00000519761 717 ntBASIC4.96□□□□□ -1.62
GPC3P51654 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.96□□□□□ -1.62
GPC3P51654 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms