Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA1P49639 AL136310.1-201ENST00000404926 654 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 MIR1303-201ENST00000408625 86 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 SLC20A1P1-201ENST00000413906 956 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC066692.1-201ENST00000421721 457 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 OR6K4P-201ENST00000423179 955 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA1P49639 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA1P49639 MTND2P22-201ENST00000444325 1033 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 MTCYBP42-201ENST00000444653 1130 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 EEF1B2P6-201ENST00000445713 673 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 CASP3P1-201ENST00000446037 609 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC112492.1-201ENST00000449607 712 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 DNAJC19P8-201ENST00000452887 259 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 APOOP2-201ENST00000461561 539 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA1P49639 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 RN7SL817P-201ENST00000480777 288 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC008565.1-201ENST00000509046 885 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 RNA5SP228-201ENST00000516232 133 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC105031.1-201ENST00000518550 476 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 HMGB1P1-201ENST00000522557 636 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 ZNF321P-202ENST00000550843 495 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 MRPS36P5-201ENST00000551909 298 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA1P49639 AL049872.1-201ENST00000556323 322 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 RPL21P7-201ENST00000557463 483 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 AL139286.1-201ENST00000604465 483 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC025588.2-201ENST00000604851 466 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC097478.2-201ENST00000610572 514 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC093783.1-201ENST00000612976 329 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AL096712.1-201ENST00000614561 159 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC091304.6-201ENST00000619761 202 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC024595.1-201ENST00000623088 387 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 AC017037.3-201ENST00000625016 472 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA1P49639 AC090897.3-201ENST00000636973 1157 ntBASIC4.26□□□□□ -1.73
HOXA1P49639 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA1P49639 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA1P49639 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA1P49639 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA1P49639 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA1P49639 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA1P49639 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA1P49639 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA1P49639 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
HOXA1P49639 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXA1P49639 SNORA62.2-201ENST00000364672 152 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA1P49639 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA1P49639 RNU6-178P-201ENST00000384631 104 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 MIR589-201ENST00000385238 99 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA1P49639 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA1P49639 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXA1P49639 HMGB3P7-201ENST00000400214 611 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 MTCO1P56-201ENST00000401674 224 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 RN7SKP16-201ENST00000410180 299 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 RNA5SP498-201ENST00000411342 120 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 HMGN1P20-201ENST00000411849 300 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 OR6E1P-201ENST00000414424 923 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 AL008987.1-201ENST00000415528 237 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA1P49639 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA1P49639 AC234064.1-201ENST00000436312 247 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA1P49639 FGF7P5-201ENST00000441829 291 ntBASIC4.25□□□□□ -1.73
HOXA1P49639 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA1P49639 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA1P49639 AL445665.1-202ENST00000452436 324 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms