Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SSR1P43307 MIR6719-201ENST00000622428 87 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AL359715.5-201ENST00000623431 443 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC092162.3-201ENST00000624511 1624 ntBASIC4.81□□□□□ -1.64
SSR1P43307 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSR1P43307 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 AC027287.1-201ENST00000553115 1453 ntBASIC4.81□□□□□ -1.64
SSR1P43307 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
SSR1P43307 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSR1P43307 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSR1P43307 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSR1P43307 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.8□□□□□ -1.64
SSR1P43307 RNA5SP52-201ENST00000362448 134 ntBASIC4.8□□□□□ -1.64
SSR1P43307 SNORA74A-201ENST00000364089 198 ntBASIC4.8□□□□□ -1.64
SSR1P43307 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.8□□□□□ -1.64
SSR1P43307 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSR1P43307 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSR1P43307 MIR921-201ENST00000401133 56 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.8□□□□□ -1.64
SSR1P43307 OR51B3P-201ENST00000412287 913 ntBASIC4.8□□□□□ -1.64
SSR1P43307 BX510359.2-201ENST00000417920 305 ntBASIC4.8□□□□□ -1.64
SSR1P43307 ARAFP1-201ENST00000422172 605 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.8□□□□□ -1.64
SSR1P43307 AC108463.1-201ENST00000450258 347 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.8□□□□□ -1.64
SSR1P43307 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
SSR1P43307 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.8□□□□□ -1.64
SSR1P43307 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.8□□□□□ -1.64
SSR1P43307 RN7SL41P-201ENST00000476144 297 ntBASIC4.8□□□□□ -1.64
SSR1P43307 SYT14P1-201ENST00000481459 721 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC108022.1-201ENST00000493466 478 ntBASIC4.8□□□□□ -1.64
SSR1P43307 RPL36AP41-201ENST00000493820 306 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.8□□□□□ -1.64
SSR1P43307 AC008638.1-201ENST00000506035 866 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.8□□□□□ -1.64
SSR1P43307 AL110118.1-201ENST00000553543 400 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.8□□□□□ -1.64
SSR1P43307 MIR4436B2-201ENST00000581415 91 ntBASIC4.8□□□□□ -1.64
SSR1P43307 MIR4436B1-201ENST00000583272 91 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.8□□□□□ -1.64
SSR1P43307 AC098935.2-201ENST00000604222 466 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AL445528.2-201ENST00000620582 470 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC004232.3-201ENST00000622977 525 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC091905.2-201ENST00000623143 306 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC004943.3-201ENST00000624116 600 ntBASIC4.8□□□□□ -1.64
SSR1P43307 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
SSR1P43307 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
SSR1P43307 EOGT-210ENST00000615922 1931 ntBASIC4.8□□□□□ -1.64
SSR1P43307 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 SNORD74.4-201ENST00000364129 80 ntBASIC4.79□□□□□ -1.64
SSR1P43307 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSR1P43307 FCF1P5-201ENST00000406490 482 ntBASIC4.79□□□□□ -1.64
SSR1P43307 AMZ2P2-201ENST00000406819 1057 ntBASIC4.79□□□□□ -1.64
SSR1P43307 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.79□□□□□ -1.64
SSR1P43307 RPL21P91-201ENST00000429231 479 ntBASIC4.79□□□□□ -1.64
SSR1P43307 YWHAEP5-201ENST00000431545 765 ntBASIC4.79□□□□□ -1.64
SSR1P43307 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.79□□□□□ -1.64
SSR1P43307 RNU6-1218P-201ENST00000458990 108 ntBASIC4.79□□□□□ -1.64
SSR1P43307 HAUS1P1-201ENST00000505275 832 ntBASIC4.79□□□□□ -1.64
SSR1P43307 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.79□□□□□ -1.64
SSR1P43307 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.79□□□□□ -1.64
SSR1P43307 BRD9P1-201ENST00000529855 560 ntBASIC4.79□□□□□ -1.64
SSR1P43307 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.79□□□□□ -1.64
SSR1P43307 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
SSR1P43307 PCNPP1-201ENST00000552501 511 ntBASIC4.79□□□□□ -1.64
SSR1P43307 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 AC015922.4-201ENST00000612568 690 ntBASIC4.79□□□□□ -1.64
SSR1P43307 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.79□□□□□ -1.64
SSR1P43307 AC015722.2-201ENST00000622210 551 ntBASIC4.79□□□□□ -1.64
SSR1P43307 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.79□□□□□ -1.64
SSR1P43307 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSR1P43307 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SSR1P43307 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.79□□□□□ -1.64
SSR1P43307 AC010928.1-201ENST00000592477 1447 ntBASIC4.79□□□□□ -1.64
SSR1P43307 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSR1P43307 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.78□□□□□ -1.64
SSR1P43307 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 NXPH1-205ENST00000602349 1953 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms