Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF9P41273 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF9P41273 RN7SKP74-201ENST00000362849 309 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 RPS26P8-201ENST00000393490 348 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 RNA5SP317-201ENST00000410176 116 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 RNA5SP311-201ENST00000411290 116 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF9P41273 OR51A6P-201ENST00000418680 1004 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 RBMY1KP-201ENST00000423480 476 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AL356276.2-201ENST00000435919 558 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF9P41273 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFSF9P41273 BNIP3P41-201ENST00000503774 571 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC093824.1-201ENST00000508796 343 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFSF9P41273 RNA5SP315-201ENST00000516340 116 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 RNA5SP312-201ENST00000517068 116 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 OR7E10P-201ENST00000526420 991 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 MIR1254-2-201ENST00000579553 63 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFSF9P41273 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF9P41273 AL122125.1-201ENST00000616999 600 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFSF9P41273 ZYXP1-201ENST00000617638 118 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC090506.2-201ENST00000624521 419 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 MIR492-201ENST00000638676 116 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
TNFSF9P41273 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TNFSF9P41273 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF9P41273 AC105074.1-201ENST00000623380 3095 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 AC006484.1-201ENST00000435086 1884 ntBASIC4.54□□□□□ -1.68
TNFSF9P41273 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 RLIMP2-201ENST00000427891 1563 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF9P41273 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 RNA5SP130-201ENST00000364431 114 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 RNU1-13P-201ENST00000384499 162 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 RNU11-4P-201ENST00000391149 133 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 SNORA57.1-201ENST00000391227 145 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 AL022722.2-201ENST00000402519 180 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 AL138787.1-202ENST00000437804 898 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 MTCO3P17-201ENST00000443775 513 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 MTND4LP12-201ENST00000448237 295 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 PSMC1P13-201ENST00000458195 985 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 RNA5SP246-201ENST00000458909 119 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFSF9P41273 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFSF9P41273 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF9P41273 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF9P41273 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFSF9P41273 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 AL109618.2-201ENST00000605527 211 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 MIR6867-201ENST00000610636 67 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 MIR7151-201ENST00000617477 60 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF9P41273 PCAT14-202ENST00000627127 3935 ntBASIC4.53□□□□□ -1.68
TNFSF9P41273 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF9P41273 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TNFSF9P41273 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF9P41273 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TNFSF9P41273 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TNFSF9P41273 AC123912.3-201ENST00000600907 1367 ntBASIC4.53□□□□□ -1.69
TNFSF9P41273 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF9P41273 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 IL6STP1-201ENST00000346911 1020 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 MIR1179-201ENST00000408703 91 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF9P41273 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 AL356095.1-201ENST00000417217 199 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AL358176.3-201ENST00000420757 454 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 OR6C71P-201ENST00000432580 913 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms