Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 AC112498.1-201ENST00000444401 332 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 TRY2P-201ENST00000448860 689 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.7□□□□□ -1.66
HNF4AP41235 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC093270.2-201ENST00000486157 792 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 NDUFA5P12-201ENST00000503796 343 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 MTATP6P22-201ENST00000507369 598 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 AC008562.1-201ENST00000521763 330 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 OR4R2P-201ENST00000530815 597 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.7□□□□□ -1.66
HNF4AP41235 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HNF4AP41235 AC025918.2-201ENST00000558683 763 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC051619.2-201ENST00000559063 397 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HNF4AP41235 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.7□□□□□ -1.66
HNF4AP41235 OR4H6P-202ENST00000603819 340 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC069304.3-201ENST00000603938 1084 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC010424.2-201ENST00000607594 443 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 OR6R2P-201ENST00000609216 300 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC004948.1-201ENST00000609858 672 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.7□□□□□ -1.66
HNF4AP41235 MIR7155-201ENST00000615925 56 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HNF4AP41235 AL596275.2-204ENST00000641628 552 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 AL596275.2-206ENST00000641957 626 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
HNF4AP41235 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.7□□□□□ -1.66
HNF4AP41235 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HNF4AP41235 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HNF4AP41235 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HNF4AP41235 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HNF4AP41235 MFSD8-220ENST00000641243 1422 ntBASIC4.7□□□□□ -1.66
HNF4AP41235 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 AC083899.2-201ENST00000423285 1376 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 OR10J6P-201ENST00000289731 930 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AC008549.2-201ENST00000333482 706 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 AP000580.1-201ENST00000404439 358 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 U3.35-201ENST00000408405 208 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 UBE2V1P11-201ENST00000411559 285 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 GTF2IP5-201ENST00000414608 731 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 EIF4A1P1-201ENST00000420241 934 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 RGS17P1-201ENST00000423358 553 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AC105402.2-201ENST00000438503 358 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 ARL5AP2-201ENST00000444698 533 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 RHEBP2-201ENST00000450289 600 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 RN7SL558P-201ENST00000497468 299 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 BTF3P13-201ENST00000513224 490 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 SETP12-201ENST00000514068 805 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.69□□□□□ -1.66
HNF4AP41235 RNU6-709P-201ENST00000517257 104 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HNF4AP41235 AC133644.2-201ENST00000608142 540 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AC016717.3-201ENST00000624730 554 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 AC009452.1-201ENST00000640823 606 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
HNF4AP41235 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
HNF4AP41235 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HNF4AP41235 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HNF4AP41235 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 RNU6-252P-201ENST00000363232 107 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 SNORA51.8-201ENST00000384234 132 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AL645733.1-201ENST00000402250 217 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 HNRNPDP2-201ENST00000406475 478 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 MTATP6P31-201ENST00000406985 692 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms