Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NPM1P35-201ENST00000533043 868 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.13□□□□□ -1.75
RFC3P40938 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.13□□□□□ -1.75
RFC3P40938 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.13□□□□□ -1.75
RFC3P40938 AC027281.1-201ENST00000574178 758 ntBASIC4.13□□□□□ -1.75
RFC3P40938 MIR3939-201ENST00000582614 106 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AC069366.1-201ENST00000583159 838 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AC005191.1-201ENST00000603950 358 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AC005962.2-201ENST00000611427 652 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AL590410.1-201ENST00000617925 333 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AL035461.2-201ENST00000619201 524 ntBASIC4.13□□□□□ -1.75
RFC3P40938 AC005086.4-201ENST00000623065 213 ntBASIC4.13□□□□□ -1.75
RFC3P40938 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFC3P40938 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.13□□□□□ -1.75
RFC3P40938 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.13□□□□□ -1.75
RFC3P40938 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFC3P40938 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 BX005019.1-201ENST00000561881 1810 ntBASIC4.12□□□□□ -1.75
RFC3P40938 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
RFC3P40938 RNU1-20P-201ENST00000363314 162 ntBASIC4.12□□□□□ -1.75
RFC3P40938 RNU6-1251P-201ENST00000364502 107 ntBASIC4.12□□□□□ -1.75
RFC3P40938 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
RFC3P40938 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.12□□□□□ -1.75
RFC3P40938 AL356387.2-201ENST00000422272 243 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AC099336.2-201ENST00000422457 254 ntBASIC4.12□□□□□ -1.75
RFC3P40938 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AC011998.1-201ENST00000433403 117 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AC093716.1-201ENST00000435923 377 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AL357520.1-201ENST00000441557 453 ntBASIC4.12□□□□□ -1.75
RFC3P40938 ISCUP1-201ENST00000454451 448 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AC099560.2-201ENST00000457554 255 ntBASIC4.12□□□□□ -1.75
RFC3P40938 RPL23AP2-201ENST00000471227 466 ntBASIC4.12□□□□□ -1.75
RFC3P40938 UBA52P3-201ENST00000491303 382 ntBASIC4.12□□□□□ -1.75
RFC3P40938 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.12□□□□□ -1.75
RFC3P40938 RNA5SP154-201ENST00000516193 111 ntBASIC4.12□□□□□ -1.75
RFC3P40938 IGKV2D-10-201ENST00000520194 281 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.12□□□□□ -1.75
RFC3P40938 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.12□□□□□ -1.75
RFC3P40938 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 AC015908.5-201ENST00000623289 343 ntBASIC4.12□□□□□ -1.75
RFC3P40938 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.12□□□□□ -1.75
RFC3P40938 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 AL355852.1-201ENST00000454081 1771 ntBASIC4.12□□□□□ -1.75
RFC3P40938 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
RFC3P40938 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFC3P40938 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RFC3P40938 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.11□□□□□ -1.75
RFC3P40938 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RFC3P40938 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.11□□□□□ -1.75
RFC3P40938 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.11□□□□□ -1.75
RFC3P40938 RPS3AP54-201ENST00000435535 734 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.11□□□□□ -1.75
RFC3P40938 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.11□□□□□ -1.75
RFC3P40938 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.11□□□□□ -1.75
RFC3P40938 RPS27AP17-201ENST00000463344 455 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AC010618.1-201ENST00000469924 477 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.11□□□□□ -1.75
RFC3P40938 IGHV3-63-201ENST00000518422 341 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 AC010476.1-201ENST00000519111 851 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.11□□□□□ -1.75
RFC3P40938 AC138701.1-201ENST00000524329 714 ntBASIC4.11□□□□□ -1.75
RFC3P40938 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 AC008638.3-201ENST00000603341 463 ntBASIC4.11□□□□□ -1.75
RFC3P40938 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 AL133370.2-201ENST00000619934 439 ntBASIC4.11□□□□□ -1.75
RFC3P40938 AL669942.2-201ENST00000620352 697 ntBASIC4.11□□□□□ -1.75
RFC3P40938 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.11□□□□□ -1.75
RFC3P40938 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 MFSD8-220ENST00000641243 1422 ntBASIC4.11□□□□□ -1.75
RFC3P40938 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFC3P40938 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RFC3P40938 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
RFC3P40938 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms