Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPA3P35244 RPL23AP59-201ENST00000399415 461 ntBASIC4.24□□□□□ -1.73
RPA3P35244 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPA3P35244 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.24□□□□□ -1.73
RPA3P35244 RPA2P2-201ENST00000419698 796 ntBASIC4.24□□□□□ -1.73
RPA3P35244 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPA3P35244 RPS27AP7-201ENST00000422792 455 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.24□□□□□ -1.73
RPA3P35244 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPA3P35244 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.24□□□□□ -1.73
RPA3P35244 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.24□□□□□ -1.73
RPA3P35244 FGF7P3-201ENST00000454645 303 ntBASIC4.24□□□□□ -1.73
RPA3P35244 RPL23AP24-201ENST00000458203 385 ntBASIC4.24□□□□□ -1.73
RPA3P35244 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.24□□□□□ -1.73
RPA3P35244 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.24□□□□□ -1.73
RPA3P35244 BNIP3P41-201ENST00000503774 571 ntBASIC4.24□□□□□ -1.73
RPA3P35244 RAB9BP1-201ENST00000519581 626 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AC107918.3-201ENST00000533272 382 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AC025423.2-201ENST00000537570 439 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.24□□□□□ -1.73
RPA3P35244 AC007599.1-201ENST00000568688 1174 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.24□□□□□ -1.73
RPA3P35244 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.24□□□□□ -1.73
RPA3P35244 AC068020.1-201ENST00000594215 661 ntBASIC4.24□□□□□ -1.73
RPA3P35244 AL121873.1-201ENST00000616013 524 ntBASIC4.24□□□□□ -1.73
RPA3P35244 uc_338.13-201ENST00000618243 179 ntBASIC4.24□□□□□ -1.73
RPA3P35244 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.24□□□□□ -1.73
RPA3P35244 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.24□□□□□ -1.73
RPA3P35244 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPA3P35244 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.24□□□□□ -1.73
RPA3P35244 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPA3P35244 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPA3P35244 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RPA3P35244 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
RPA3P35244 VPS35P1-201ENST00000563400 1518 ntBASIC4.23□□□□□ -1.73
RPA3P35244 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
RPA3P35244 RNA5SP175-201ENST00000364275 119 ntBASIC4.23□□□□□ -1.73
RPA3P35244 OR13C3-201ENST00000374781 1108 ntBASIC4.23□□□□□ -1.73
RPA3P35244 RPL5P19-201ENST00000404228 893 ntBASIC4.23□□□□□ -1.73
RPA3P35244 ELOCP19-201ENST00000411919 318 ntBASIC4.23□□□□□ -1.73
RPA3P35244 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 EIF1P3-201ENST00000423841 334 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.23□□□□□ -1.73
RPA3P35244 VDAC1P6-201ENST00000430062 855 ntBASIC4.23□□□□□ -1.73
RPA3P35244 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.23□□□□□ -1.73
RPA3P35244 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.23□□□□□ -1.73
RPA3P35244 CYCSP42-201ENST00000450823 238 ntBASIC4.23□□□□□ -1.73
RPA3P35244 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
RPA3P35244 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.23□□□□□ -1.73
RPA3P35244 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 AC093840.1-201ENST00000511599 336 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
RPA3P35244 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.23□□□□□ -1.73
RPA3P35244 AC084759.1-201ENST00000561168 290 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC021483.2-201ENST00000567415 758 ntBASIC4.23□□□□□ -1.73
RPA3P35244 SNORD39.2-201ENST00000579995 76 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC113403.1-201ENST00000604910 193 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AL356218.2-201ENST00000605264 187 ntBASIC4.23□□□□□ -1.73
RPA3P35244 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
RPA3P35244 AC025175.1-201ENST00000606482 759 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC022960.2-201ENST00000616300 666 ntBASIC4.23□□□□□ -1.73
RPA3P35244 RMST_9.1-201ENST00000619945 193 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC103858.2-201ENST00000621471 543 ntBASIC4.23□□□□□ -1.73
RPA3P35244 AC008013.2-202ENST00000637965 364 ntBASIC4.23□□□□□ -1.73
RPA3P35244 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPA3P35244 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 AL133243.3-201ENST00000617415 3004 ntBASIC4.23□□□□□ -1.73
RPA3P35244 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPA3P35244 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.23□□□□□ -1.73
RPA3P35244 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.22□□□□□ -1.73
RPA3P35244 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
RPA3P35244 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RPA3P35244 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RPA3P35244 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RPA3P35244 GCNT6-201ENST00000379591 934 ntBASIC4.22□□□□□ -1.73
RPA3P35244 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.22□□□□□ -1.73
RPA3P35244 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPA3P35244 RPL12P34-201ENST00000424532 479 ntBASIC4.22□□□□□ -1.73
RPA3P35244 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.22□□□□□ -1.73
RPA3P35244 NFYAP1-201ENST00000431953 972 ntBASIC4.22□□□□□ -1.73
RPA3P35244 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.22□□□□□ -1.73
RPA3P35244 CEACAMP1-201ENST00000434624 1035 ntBASIC4.22□□□□□ -1.73
RPA3P35244 HMGB3P10-201ENST00000434734 572 ntBASIC4.22□□□□□ -1.73
RPA3P35244 AL450263.2-201ENST00000439400 589 ntBASIC4.22□□□□□ -1.73
RPA3P35244 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms