Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC073052.1-201ENST00000440417 714 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 MTCO2P3-201ENST00000442543 421 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC005410.1-202ENST00000460347 485 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 NIFKP7-201ENST00000503365 834 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 MTCYBP16-201ENST00000509187 1129 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC117532.1-201ENST00000514638 323 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 Y_RNA.719-201ENST00000517156 106 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC100784.1-201ENST00000522790 310 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC133555.2-201ENST00000550213 292 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AL049839.1-201ENST00000556151 657 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC116553.2-201ENST00000564203 463 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 AC131159.1-201ENST00000621854 213 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 AP002782.1-201ENST00000623107 614 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 TRIM51GP-201ENST00000534741 1350 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-DOAP06340 MAPK10-328ENST00000641553 4009 ntBASIC5.76□□□□□ -1.49
HLA-DOAP06340 CASC19-260ENST00000641828 2001 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC021755.1-201ENST00000559747 1447 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 MFSD8-216ENST00000641147 4009 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AP001029.2-203ENST00000589795 4910 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 MIR141-201ENST00000384975 95 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 RPL21P67-201ENST00000402896 478 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 RSU1P3-201ENST00000412878 835 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 BTF3P9-201ENST00000418784 283 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AL513175.2-201ENST00000422071 443 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AL365396.1-201ENST00000430854 671 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 MRPS21P3-201ENST00000436696 262 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC016831.4-201ENST00000438302 307 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 RPL7AP61-201ENST00000443410 636 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 MTCO2P7-201ENST00000446518 666 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 MTND2P28-201ENST00000457540 1044 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC010326.1-201ENST00000462726 602 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 RPL5P13-201ENST00000462840 709 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC096741.1-201ENST00000472250 846 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 RN7SL860P-201ENST00000473738 223 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 RN7SL459P-201ENST00000481078 302 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 SCARNA22-201ENST00000503991 125 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 MRPS33P3-201ENST00000513456 322 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 SNORA3.4-201ENST00000515969 96 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 RNU6-1028P-201ENST00000517164 93 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 RAB9BP1-201ENST00000519581 626 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC006349.1-201ENST00000555526 235 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC022726.1-201ENST00000587475 207 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC068790.7-201ENST00000602347 528 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 SUMO2P14-201ENST00000604488 293 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC121247.2-201ENST00000604776 136 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC007349.4-201ENST00000608114 532 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AL360219.1-201ENST00000610230 366 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AP003497.2-201ENST00000624220 967 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 MIR7641-1-201ENST00000627518 61 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DOAP06340 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.75□□□□□ -1.49
HLA-DOAP06340 AC092451.3-201ENST00000625067 1343 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 AC005005.4-201ENST00000623789 16698 ntBASIC5.74□□□□□ -1.49
HLA-DOAP06340 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DOAP06340 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DOAP06340 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms