Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.39□□□□□ -1.55
COL5A2P05997 AL160281.1-201ENST00000605307 311 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 AC021242.1-201ENST00000507315 2035 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A2P05997 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.39□□□□□ -1.55
COL5A2P05997 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A2P05997 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A2P05997 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 Z82217.1-201ENST00000625157 8149 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 AC005005.4-201ENST00000623789 16698 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL5A2P05997 RN7SKP186-201ENST00000365371 303 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 SNORA11.2-201ENST00000408318 127 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 AC104306.1-201ENST00000449702 371 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.39□□□□□ -1.55
COL5A2P05997 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 AC015726.1-201ENST00000602353 681 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 MIR8069-1-201ENST00000616627 86 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 AL645927.2-201ENST00000618350 349 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 MIR8069-2-201ENST00000621412 86 ntBASIC5.39□□□□□ -1.55
COL5A2P05997 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL5A2P05997 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A2P05997 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A2P05997 AC032011.1-201ENST00000611703 1549 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL5A2P05997 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
COL5A2P05997 AC233289.1-201ENST00000403700 508 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A2P05997 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A2P05997 PDSS1P1-201ENST00000422953 1114 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 PLGLA-201ENST00000465668 449 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 RPL29P14-201ENST00000495837 428 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 NDUFA5P2-201ENST00000519723 344 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 AC090151.1-201ENST00000520784 730 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A2P05997 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.38□□□□□ -1.55
COL5A2P05997 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.38□□□□□ -1.55
COL5A2P05997 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.38□□□□□ -1.55
COL5A2P05997 AC027176.2-201ENST00000559166 746 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 AC005412.1-201ENST00000580812 1049 ntBASIC5.38□□□□□ -1.55
COL5A2P05997 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.38□□□□□ -1.55
COL5A2P05997 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL5A2P05997 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL5A2P05997 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.37□□□□□ -1.55
COL5A2P05997 PDSS1P2-201ENST00000449397 678 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 AL451050.1-201ENST00000450126 415 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 AC093815.1-201ENST00000508637 280 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.37□□□□□ -1.55
COL5A2P05997 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.37□□□□□ -1.55
COL5A2P05997 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.37□□□□□ -1.55
COL5A2P05997 AL049634.3-201ENST00000604968 457 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 AC019278.1-201ENST00000623516 479 ntBASIC5.37□□□□□ -1.55
COL5A2P05997 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.37□□□□□ -1.55
COL5A2P05997 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL5A2P05997 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL5A2P05997 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.36□□□□□ -1.55
COL5A2P05997 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.36□□□□□ -1.55
COL5A2P05997 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.36□□□□□ -1.55
COL5A2P05997 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
COL5A2P05997 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 AC092691.2-201ENST00000461787 803 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.36□□□□□ -1.55
COL5A2P05997 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.36□□□□□ -1.55
COL5A2P05997 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.36□□□□□ -1.55
COL5A2P05997 AC005972.3-201ENST00000606304 481 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms