Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 IGHV3-32-201ENST00000519182 355 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1BO75841 MORF4L1P3-201ENST00000525966 950 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1BO75841 AC006064.5-201ENST00000541782 248 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 CBX3P5-201ENST00000552017 521 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC063950.1-201ENST00000552036 308 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 GNRHR2P1-201ENST00000555315 631 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1BO75841 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1BO75841 AC011447.4-201ENST00000587562 111 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC005479.3-201ENST00000602790 431 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC104662.1-201ENST00000604448 511 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 AC005021.1-201ENST00000608730 355 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1BO75841 AL391597.1-201ENST00000618707 694 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1BO75841 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
UPK1BO75841 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1BO75841 CR381670.1-201ENST00000624291 1693 ntBASIC3.68□□□□□ -1.82
UPK1BO75841 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1BO75841 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK1BO75841 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 AC114546.3-201ENST00000623582 1734 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
UPK1BO75841 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
UPK1BO75841 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
UPK1BO75841 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
UPK1BO75841 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1BO75841 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 AC114495.1-201ENST00000441274 436 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1BO75841 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK1BO75841 PPIAP21-201ENST00000464473 501 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 RN7SL612P-201ENST00000497704 295 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1BO75841 AC117525.1-201ENST00000515228 503 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 IGKV2-4-201ENST00000523070 340 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.67□□□□□ -1.82
UPK1BO75841 NANOGNBP2-201ENST00000544753 553 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AL109766.1-201ENST00000555080 552 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1BO75841 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 AC022884.3-201ENST00000579571 248 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1BO75841 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1BO75841 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.67□□□□□ -1.82
UPK1BO75841 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1BO75841 AL359513.1-201ENST00000614364 557 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 uc_338.9-201ENST00000617424 182 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AC007546.1-201ENST00000619452 559 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AP003497.2-201ENST00000624220 967 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 AC119674.1-212ENST00000641155 993 ntBASIC3.67□□□□□ -1.82
UPK1BO75841 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
UPK1BO75841 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1BO75841 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK1BO75841 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
UPK1BO75841 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1BO75841 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK1BO75841 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1BO75841 RN7SKP275-201ENST00000364626 301 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
UPK1BO75841 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 RNU6-564P-201ENST00000410983 104 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK1BO75841 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.66□□□□□ -1.82
UPK1BO75841 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1BO75841 NPM1P34-201ENST00000428821 893 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 OR2B7P-201ENST00000429302 934 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 ARL5AP3-201ENST00000439327 386 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AC092809.1-201ENST00000441469 474 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1BO75841 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1BO75841 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AC004069.2-201ENST00000505438 1114 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.66□□□□□ -1.82
UPK1BO75841 AC021146.7-201ENST00000509604 775 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK1BO75841 RNU6-1308P-201ENST00000516817 103 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AC007424.1-203ENST00000554613 687 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 MIR4330-201ENST00000579077 105 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 AC110743.1-201ENST00000584870 478 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1BO75841 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.66□□□□□ -1.82
UPK1BO75841 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1BO75841 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
UPK1BO75841 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms