Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 XKRY-201ENST00000510392 1100 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 HMGN1P9-201ENST00000515212 298 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 Y_RNA.655-201ENST00000515919 96 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 IGKV2D-10-201ENST00000520194 281 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS4BO75351 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS4BO75351 MTCYBP13-201ENST00000578634 1093 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 AP005137.2-201ENST00000609238 400 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 MIR6820-201ENST00000611508 62 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC025574.2-201ENST00000615621 514 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 MIR4278-201ENST00000636094 69 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 VPS35P1-201ENST00000563400 1518 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS4BO75351 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS4BO75351 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 CASC19-206ENST00000641028 1430 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
VPS4BO75351 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 SGO1P2-201ENST00000429458 1589 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 RN7SKP103-201ENST00000363848 320 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 MIR525-201ENST00000384978 85 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 MIR551A-201ENST00000385042 96 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS4BO75351 MIR550A3-201ENST00000390735 95 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 EI24P3-201ENST00000399046 1062 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 AL645733.1-201ENST00000402250 217 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS4BO75351 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 RPL21P43-201ENST00000425440 472 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 ISCA1P2-201ENST00000438679 421 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS4BO75351 THAP5P1-201ENST00000439089 262 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AL390119.1-201ENST00000440329 312 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 AL606662.1-201ENST00000445763 553 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 RPL31P44-201ENST00000447680 377 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 RN7SL51P-201ENST00000468230 285 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC104687.1-201ENST00000485829 412 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 ENPP7P11-201ENST00000505915 627 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC111000.2-201ENST00000507775 550 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 OR5H4P-201ENST00000510851 923 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 RNU6-416P-201ENST00000516265 103 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS4BO75351 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC022360.1-201ENST00000521058 340 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC092709.1-201ENST00000521355 1045 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 IGJP1-201ENST00000522682 475 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 AP000619.3-201ENST00000535634 1127 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 POLR2KP1-201ENST00000553226 168 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AL049779.2-201ENST00000553847 315 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 BNIP3P26-201ENST00000600827 554 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC124312.4-201ENST00000605533 310 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AL354976.1-201ENST00000613843 387 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC023158.2-201ENST00000614876 543 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC090510.2-201ENST00000617465 629 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AC068870.2-201ENST00000620635 389 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS4BO75351 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 SAMMSON-209ENST00000641222 1100 ntBASIC5.3□□□□□ -1.56
VPS4BO75351 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
VPS4BO75351 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS4BO75351 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VPS4BO75351 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms