Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.63□□□□□ -1.19
RNF40O75150 AC007546.1-201ENST00000619452 559 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC098657.3-201ENST00000620434 263 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AC091953.2-201ENST00000623979 160 ntBASIC7.63□□□□□ -1.19
RNF40O75150 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 ZNF101P1-201ENST00000435701 1720 ntBASIC7.63□□□□□ -1.19
RNF40O75150 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.63□□□□□ -1.19
RNF40O75150 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.63□□□□□ -1.19
RNF40O75150 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF40O75150 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RNF40O75150 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RNF40O75150 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.62□□□□□ -1.19
RNF40O75150 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF40O75150 PPIAP22-201ENST00000358455 498 ntBASIC7.62□□□□□ -1.19
RNF40O75150 Y_RNA.364-201ENST00000365532 101 ntBASIC7.62□□□□□ -1.19
RNF40O75150 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RNF40O75150 Y_RNA.530-201ENST00000384587 101 ntBASIC7.62□□□□□ -1.19
RNF40O75150 RNU6-33P-201ENST00000384793 107 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AP000534.2-201ENST00000412729 568 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC074085.1-201ENST00000413598 418 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC007562.1-201ENST00000421819 517 ntBASIC7.62□□□□□ -1.19
RNF40O75150 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 RPS3AP38-201ENST00000435889 763 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF40O75150 LIN28AP2-201ENST00000445283 458 ntBASIC7.62□□□□□ -1.19
RNF40O75150 TVP23CP1-201ENST00000450317 639 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 AC068522.1-201ENST00000482895 345 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC083904.1-201ENST00000487828 231 ntBASIC7.62□□□□□ -1.19
RNF40O75150 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 RPL7L1P7-201ENST00000509986 724 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 AC087360.1-201ENST00000518788 616 ntBASIC7.62□□□□□ -1.19
RNF40O75150 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AL137100.2-201ENST00000555786 315 ntBASIC7.62□□□□□ -1.19
RNF40O75150 NCAPGP2-201ENST00000557911 754 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF40O75150 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 AC009955.2-201ENST00000597288 542 ntBASIC7.62□□□□□ -1.19
RNF40O75150 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF40O75150 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 AC018889.1-201ENST00000605372 397 ntBASIC7.62□□□□□ -1.19
RNF40O75150 U47924.1-201ENST00000606539 434 ntBASIC7.62□□□□□ -1.19
RNF40O75150 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 AC069222.1-201ENST00000608028 3360 ntBASIC7.62□□□□□ -1.19
RNF40O75150 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF40O75150 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF40O75150 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
RNF40O75150 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 PNPT1P2-201ENST00000456768 2050 ntBASIC7.61□□□□□ -1.19
RNF40O75150 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms