Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TCP11X3P-202ENST00000514289 1254 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.81□□□□□ -1.64
CLDN3O15551 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.81□□□□□ -1.64
CLDN3O15551 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN3O15551 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AL008729.2-201ENST00000606393 473 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN3O15551 MIR378J-201ENST00000611988 109 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC131238.1-201ENST00000617135 328 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN3O15551 OR5AC4P-202ENST00000642086 985 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN3O15551 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
CLDN3O15551 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CLDN3O15551 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN3O15551 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN3O15551 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CLDN3O15551 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 OR4K17-201ENST00000315543 1032 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 AC126755.2-208ENST00000327792 462 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC138969.1-213ENST00000331436 462 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 RNA5SP307-201ENST00000362863 116 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 RNU6-532P-201ENST00000384318 107 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 SNORA11F-201ENST00000408237 128 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 RNU4-25P-201ENST00000410569 230 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN3O15551 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 AC009237.10-201ENST00000414112 510 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 AL691447.1-201ENST00000419456 387 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AL356806.1-201ENST00000422524 916 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 CBX1P1-201ENST00000440184 427 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 ARL4AP1-201ENST00000503220 705 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 ATP1B1P1-201ENST00000509767 915 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
CLDN3O15551 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN3O15551 AC068714.1-201ENST00000559623 800 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN3O15551 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN3O15551 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN3O15551 SLC25A36P1-201ENST00000590111 465 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC113403.1-201ENST00000604910 193 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AC010201.1-201ENST00000605051 540 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN3O15551 AL121890.3-201ENST00000618494 516 ntBASIC4.8□□□□□ -1.64
CLDN3O15551 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN3O15551 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN3O15551 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN3O15551 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN3O15551 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN3O15551 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 AC092079.1-201ENST00000558620 1985 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 MIR421-201ENST00000365696 85 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN3O15551 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN3O15551 RNA5SP372-201ENST00000390836 115 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 HDGFP1-201ENST00000405943 252 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 SNORA74C-2-201ENST00000411179 201 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 RPL26P37-201ENST00000411983 438 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC073136.2-201ENST00000417282 849 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN3O15551 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN3O15551 AL132765.1-201ENST00000434165 553 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 ELOCP10-201ENST00000440624 327 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN3O15551 CCDC75P1-201ENST00000469247 791 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 RN7SL303P-201ENST00000469773 251 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 METTL15P1-201ENST00000481421 1045 ntBASIC4.79□□□□□ -1.64
CLDN3O15551 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN3O15551 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms