Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC078857.1-201ENST00000469870 667 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 AC006511.1-201ENST00000470614 315 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 BX284632.1-201ENST00000478218 541 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 RN7SL205P-201ENST00000490174 284 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC188H7C350 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC188H7C350 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC188H7C350 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC188H7C350 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC188H7C350 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC006116.3-201ENST00000592968 361 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AF230666.2-201ENST00000602328 725 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 EIF3FP1-201ENST00000613970 806 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC097460.3-201ENST00000623099 442 ntBASIC4.76□□□□□ -1.65
CCDC188H7C350 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC188H7C350 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC188H7C350 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC188H7C350 AC027290.2-201ENST00000623210 18662 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC188H7C350 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC188H7C350 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 LINC01109-201ENST00000603837 3081 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 RNA5SP52-201ENST00000362448 134 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 RN7SKP95-201ENST00000362860 303 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC188H7C350 OR6K3-202ENST00000368146 996 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 BMS1P3-201ENST00000372011 932 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 RNU6-796P-201ENST00000391086 107 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 Z98745.1-201ENST00000402553 494 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AL121834.1-202ENST00000404494 277 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC188H7C350 VN1R42P-201ENST00000424651 344 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC005189.1-201ENST00000431286 310 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC188H7C350 CNOT7P2-201ENST00000441051 832 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC108463.1-201ENST00000450258 347 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC010733.1-201ENST00000451515 401 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 MTCO2P9-201ENST00000503214 694 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC188H7C350 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 ATP5LP3-201ENST00000514223 304 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC188H7C350 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC188H7C350 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC188H7C350 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 MIR3176-201ENST00000582210 90 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC090181.2-201ENST00000602975 672 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC103792.1-201ENST00000603591 919 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC013244.1-201ENST00000604279 193 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC015813.4-201ENST00000610469 179 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 AC097372.4-201ENST00000625025 466 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC188H7C350 AC000123.3-201ENST00000624029 4975 ntBASIC4.75□□□□□ -1.65
CCDC188H7C350 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC188H7C350 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CCDC188H7C350 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC188H7C350 NXPH1-205ENST00000602349 1953 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC188H7C350 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC188H7C350 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC188H7C350 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC188H7C350 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC188H7C350 RNU1-15P-201ENST00000353977 144 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 RNA5SP307-201ENST00000362863 116 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 RNU6-609P-201ENST00000365459 107 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 RNU6-1005P-201ENST00000384519 107 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 LAP3P1-201ENST00000403648 294 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 AC004690.1-201ENST00000418216 328 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 RPS20P1-201ENST00000434853 354 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC188H7C350 RPL7P33-201ENST00000444159 742 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 AC112498.1-201ENST00000444401 332 ntBASIC4.74□□□□□ -1.65
CCDC188H7C350 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms