Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL121657.1-201ENST00000327215 531 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR383-201ENST00000362257 73 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNU6-729P-201ENST00000384399 107 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL022722.2-201ENST00000402519 180 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 FCF1P5-201ENST00000406490 482 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPS12P5-201ENST00000423449 371 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPS3AP54-201ENST00000435535 734 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 MTND4LP12-201ENST00000448237 295 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC113430.1-201ENST00000506872 718 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 OR8G5-201ENST00000524943 1041 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC084033.1-201ENST00000550830 633 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 ADAD1P2-201ENST00000588476 646 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC067959.1-201ENST00000604334 379 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC245389.2-201ENST00000616023 576 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC242843.1-201ENST00000618702 573 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL139254.3-201ENST00000641097 674 ntBASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TMX2-CTNND1H3BSU7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
TMX2-CTNND1H3BSU7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 VN1R8P-201ENST00000407739 893 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNU6-628P-201ENST00000410675 107 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 NFYAP1-201ENST00000431953 972 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 CDC27P1-201ENST00000445384 715 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 HMGB3P14-201ENST00000494195 599 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPS6P4-201ENST00000494693 758 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 HMGB1P23-201ENST00000518743 568 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR8R1P-201ENST00000543943 764 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 BNIP3P33-201ENST00000598912 569 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC022960.2-201ENST00000616300 666 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 MIR8059-201ENST00000620427 81 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC090506.2-201ENST00000624521 419 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC087190.4-201ENST00000574616 8334 ntBASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMX2-CTNND1H3BSU7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMX2-CTNND1H3BSU7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms