Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC122134.1-201ENST00000565664 1104 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC023824.3-201ENST00000569003 562 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 MTND4LP24-201ENST00000572277 291 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 MIR3691-201ENST00000578066 90 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 SNORA74C-1-201ENST00000580726 201 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 ZNF92P3-201ENST00000596594 954 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC009237.15-201ENST00000610252 501 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AC022467.1-201ENST00000614738 749 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 VN1R7P-201ENST00000619242 903 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 AL137100.1-201ENST00000556703 1620 ntBASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
TCRBV7S3A2A0A539 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 MTCO1P6-201ENST00000481192 1384 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC097461.1-201ENST00000568928 2821 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 SNORA62.2-201ENST00000364672 152 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 SNORA70-201ENST00000384436 135 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 MIR223-201ENST00000385204 110 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RNU6-1242P-201ENST00000391052 103 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AL049545.1-201ENST00000401856 572 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AL356320.2-201ENST00000417263 507 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RPL7P57-201ENST00000423238 740 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RPL7P34-201ENST00000433316 712 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC093414.1-201ENST00000434712 514 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 NMNAT1P2-201ENST00000435192 860 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 NANOGP2-201ENST00000435391 727 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RPL7P11-201ENST00000437586 658 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 EEF1A1P39-201ENST00000440791 250 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AL035551.1-201ENST00000446931 348 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RPL31P44-201ENST00000447680 377 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 OTX2P1-201ENST00000450956 354 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC004263.1-201ENST00000479327 332 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RPL23AP44-201ENST00000482216 473 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC011037.1-201ENST00000483964 558 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 RN7SL30P-201ENST00000488416 306 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC092593.2-201ENST00000513866 913 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 MTCO3P15-201ENST00000526563 574 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC092490.3-201ENST00000545370 572 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 POLR2KP1-201ENST00000553226 168 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 MTCO1P40-201ENST00000574371 625 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC008751.2-201ENST00000597885 980 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC125494.2-201ENST00000602431 657 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 MIR7973-1-201ENST00000614683 76 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC231759.1-201ENST00000616455 597 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AP002782.1-201ENST00000623107 614 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC009120.7-201ENST00000623452 780 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 ZNF652P1-201ENST00000442420 1309 ntBASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TCRBV7S3A2A0A539 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 AC100871.1-201ENST00000507871 1456 ntBASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms