Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009852.2-201ENST00000567898 485 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 MTCYBP33-201ENST00000575007 1130 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC040904.1-201ENST00000590850 223 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC110760.3-201ENST00000598794 467 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC004987.4-201ENST00000603383 338 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AL163642.2-201ENST00000604722 1019 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 uc_338.26-201ENST00000612659 160 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC116447.1-201ENST00000613153 453 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC139792.2-201ENST00000624218 587 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 MKKS-204ENST00000639674 192 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 OR11H2-202ENST00000641517 1085 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC079776.5-201ENST00000641920 211 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 CASC19-248ENST00000641674 1356 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01963-201ENST00000562038 3148 ntBASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC107982.1-201ENST00000507171 1300 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AL591135.1-201ENST00000401578 5914 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AL353796.1-201ENST00000561542 3241 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU5D-1-201ENST00000363299 116 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU4-4P-201ENST00000364588 130 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 FMO7P-201ENST00000436045 768 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MTND4P32-201ENST00000437189 1237 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RPS12P17-201ENST00000438591 377 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AL663074.2-201ENST00000440621 479 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 UBE2D3P4-201ENST00000441973 436 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC023141.8-201ENST00000442554 208 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 EEF1B2P5-201ENST00000444820 548 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MTND2P19-201ENST00000449129 1012 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 NF1P3-201ENST00000457709 450 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011225.1-201ENST00000457751 369 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL31P3-201ENST00000458430 332 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC006511.1-201ENST00000470614 315 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL7AP10-201ENST00000481016 791 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009120.1-201ENST00000493458 473 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 SETP14-201ENST00000497538 873 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011352.3-201ENST00000505162 593 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC021146.8-201ENST00000507455 733 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 IGLV3-30-201ENST00000524362 298 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC015720.2-201ENST00000567709 334 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC124312.4-201ENST00000605533 310 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC007204.2-201ENST00000615022 616 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 AC243756.2-201ENST00000618406 463 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms